PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G21760.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 217aa    MW: 22461.4 Da    PI: 11.1567
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G21760.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.5e-1895144255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr++  +g+W+AeIrdp+    + +r++lg+f tae+Aa+a++aa+++++g
  ONIVA02G21760.1  95 RYRGVRRRL-WGKWAAEIRDPR----KaARVWLGTFRTAEDAARAYDAAALRFRG 144
                      7*****877.**********94....36*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MAALFEAAET AAIVAALTRV IADGGRGGGG GVCVPPPAPS LVVPPRAGTG GGRRVDVARE  60
EEMVGVVSAG DHAGGANVAE AAAAVVVAAP ATARRYRGVR RRLWGKWAAE IRDPRKAARV  120
WLGTFRTAED AARAYDAAAL RFRGRRAKLN FPEEVSRPWQ GHDVDHMSCS PPSISNARFL  180
GSWTFGPPPP PSRSVAAVAT TLLGGSHGGN GAENGRE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12431GGRGGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.14e-18ERF family protein