PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G21790.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 527aa MW: 54400.1 Da PI: 7.4099

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G21790.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.3	5.5e-13	252	296	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rEr RR+r+N+ f+ +r+l+P++ +K s +ei A+ YIk+Lq ONIVA02G21790.1 252 VRERERRRRMNDMFAGIRRLVPNL----PEKSSRVEIIDGAIAYIKMLQ 296 59*******************6....39****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MSQEEQRHGR QLPLATSGVI TFNGVPLSPL TAGVESDGDD DVVIVDACNN GKRKVGDGEE 60 EGRGSQGGDD AGGAGASSSS SSSAAAAAAA ARANTVVPVP QRAARGATAP TPRPVAPPQA 120 GTWPLPARAA APHRRARHGV RRAEEPLSCS LLRCTFACFA TMSQEEQRHG RQLPLATSGV 180 ITFNGVPLSP LTAGVESDGD DDDVVIVDAC NNGKRKVGDG EEEGRGSQGG DDDDDVVAVH 240 GGGGNRACMF AVRERERRRR MNDMFAGIRR LVPNLPEKSS RVEIIDGAIA YIKMLQGEEV 300 RMEAQKQELQ RERDRLAMEV AAAAGGAGAS SSSSSAAAAA VTVAAYGPAG AVGSSSSSAA 360 AAAAAAARAN TVVPVPQRAA RGATPPTPRP VAPPQAGTWP LPAPAAMPPP PPPPTGAAAV 420 APPPSLKTWS WGDNVVVSVL GNIGNMTVRA PLCRTGVLAM ASAALKRYNI TAVTSLSGTD 480 ASRTQNMFMF YTIIDMPDRQ PQFVHPKVFE AMYRAAAAEI AAWINCY

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MSQEEQRHGR QLPLATSGVI TFNGVPLSPL TAGVESDGDD DVVIVDACNN GKRKVGDGEE  60
EGRGSQGGDD AGGAGASSSS SSSAAAAAAA ARANTVVPVP QRAARGATAP TPRPVAPPQA  120
GTWPLPARAA APHRRARHGV RRAEEPLSCS LLRCTFACFA TMSQEEQRHG RQLPLATSGV  180
ITFNGVPLSP LTAGVESDGD DDDVVIVDAC NNGKRKVGDG EEEGRGSQGG DDDDDVVAVH  240
GGGGNRACMF AVRERERRRR MNDMFAGIRR LVPNLPEKSS RVEIIDGAIA YIKMLQGEEV  300
RMEAQKQELQ RERDRLAMEV AAAAGGAGAS SSSSSAAAAA VTVAAYGPAG AVGSSSSSAA  360
AAAAAAARAN TVVPVPQRAA RGATPPTPRP VAPPQAGTWP LPAPAAMPPP PPPPTGAAAV  420
APPPSLKTWS WGDNVVVSVL GNIGNMTVRA PLCRTGVLAM ASAALKRYNI TAVTSLSGTD  480
ASRTQNMFMF YTIIDMPDRQ PQFVHPKVFE AMYRAAAAEI AAWINCY

Link Out ? help Back to Top
Ensembl	ONIVA02G21790.1