PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G21900.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family FAR1
Protein Properties Length: 148aa    MW: 16868.4 Da    PI: 6.9312
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G21900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.44.7e-0870105138
             FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCske 38 
                      +fY+ YA++vGFs+r+ ++kk   +g +  + f C ++
  ONIVA02G21900.1  70 EFYECYAHRVGFSIRIGQHKKV--DGVVLYKCFLCANN 105
                      6*****************9998..9**********875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MSMARRLEFD DVHSDAESVT TGVPHRRAQY IKPQKSTSIP FCGSYFVPEC DDSVVPHIGM  60
TFMDVESAKE FYECYAHRVG FSIRIGQHKK VDGVVLYKCF LCANNSLLRF GIGHDGHPLS  120
VLDLAMELYH CEKVFLNISN MVREKVYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.11e-09FAR1 family protein