PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G26110.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 299aa    MW: 30905.3 Da    PI: 8.3879
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G26110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.1e-12235280655
                      HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +++Er RR ri +++ +L+el+P+     +k  s a++L +Ave+Ik Lq
  ONIVA02G26110.1 235 SIAERERRTRISEKLRKLQELVPNM----DKQTSTADMLDLAVEHIKGLQ 280
                      689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MMRRFLPVGG GGGGGVEPSS SSTTPQRGEA EAAGLRFGGG DISLGPHGGG GGGGGHGHQL  60
QDGSVDLLAR HSSSPAGFFS NLMASNGFPG SKGGGGSGAE AHHHHHHPSM AGSGSGSSSG  120
GRKMKSQLSF TAGPPHLSHI AEDGAFPDRA GAEASVPRTF SAGGSSGGGG FSIVGPWEES  180
RDIISTLGGY ESQFGGMAST SALEMAGMDR YLQLQHDQVP FKVRAKRGCA THPRSIAERE  240
RRTRISEKLR KLQELVPNMD KQTSTADMLD LAVEHIKGLQ SQLQALKHEQ EKCTCCSRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.13e-47bHLH family protein