PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G26290.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family DBB
Protein Properties Length: 256aa    MW: 27393.6 Da    PI: 5.1167
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G26290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.54.9e-07446541
         zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                      C+ +e+  +   C  ++  lC+ C +e H        H++ p
  ONIVA02G26290.1  4 QCDACESAAAAVVCCADEAALCAACDVEVHAAnklagkHQRLP 46
                     7*******9*********************6678888898877 PP
2zf-B_box279.1e-095485334
         zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeH 34
                      ++C+ ++ek + +fC +++ l+C+dC + +H
  ONIVA02G26290.1 54 LPRCDVCQEKAAFIFCVEDRALFCRDCDEPIH 85
                     689**************************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MKIQCDACES AAAAVVCCAD EAALCAACDV EVHAANKLAG KHQRLPLEAL SARLPRCDVC  60
QEKAAFIFCV EDRALFCRDC DEPIHVPGTL SGNHQRYLAT GIRVGFASAS PCDGGSDAHD  120
SDHHAPPMGS SEHHHHHQQP APTVAVDTPS PQFLPQGWAL QKESSPPLGF QELEWFADID  180
LFHNQAPKGG AAAGRTTAEV PELFASQAAN DVAYYRPPTR TAAAAFTAAT GFRQSKKGRV  240
ELPDDEEDYL IVPDLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31380.14e-42DBB family protein