PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G28320.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GATA
Protein Properties Length: 434aa    MW: 45251 Da    PI: 8.4996
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G28320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.12.9e-19353387135
             GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                      Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  ONIVA02G28320.1 353 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRL 387
                      *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MTHQALIPST PPSAFSPASH FLHASSSSSS PSLSSQAVVA AAAAAMSSFA HHHHGSLVEK  60
DGRMSALRSS LRPYEAAEEM AAAAAAGGPA AWGAVERGAG MMGDGFSVED LLDLEELCEV  120
DRDGGEQGEA AAAAAAAAAV EKERSSDSHG SSVVSYEPMP LLPPVMDLPA HDVEELEWVS  180
RIMDDSLAEL PLPQLPAAAA ALAACGKPQH RRPHEGAASA LLDPMRTPTI CALSTEALVP  240
VKSRRSKRSR ASVWSLSGAP LSDSTSSSST ATTSSCSSSA SFSPFLQYVD FPALVASDLL  300
DEQPRSKKSK HGKNGKQKPK KRGRKPKHQQ PPHLAAAAAA GGGALPATGD RRCSHCGVQK  360
TPQWRAGPEG AKTLCNACGV RYKSGRLLPE YRPACSPTFV SSLHSNSHRK VLEMRRKKET  420
PVIVAAAAPA VASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-39GATA family protein