PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G28610.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 234aa MW: 25724.2 Da PI: 8.7066

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G28610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101	7.1e-32	159	217	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsY+rCt+++C+vkk+ver ++d ++v++tYeg+H+h+ ONIVA02G28610.1 159 LDDGYKWRKYGQKVVKNSLHPRSYFRCTHSNCRVKKRVERLSTDCRMVITTYEGRHTHS 217 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MEGGGQLGTC LPNFYLLPDH HGMPLPPPLQ LPCHPKLLQM PFDQEDQRGI HGVMLSSDHC 60 GLYPLPALPL SNSAAAAAAT VALGKHSAAA GSMPNIGGAE EVATTVTKAG NESTTCNGST 120 TWWRGSTMAA AGEKGKMKIR RKMREPRFCF QTRSEVDVLD DGYKWRKYGQ KVVKNSLHPR 180 SYFRCTHSNC RVKKRVERLS TDCRMVITTY EGRHTHSPCD DNSSGEHTNC FSSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	4e-62	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G28610.1