PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G30750.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 308aa    MW: 33658.1 Da    PI: 10.3826
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G30750.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3100.78.7e-3237141199
                      EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.S CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.s 88 
                      f+kv tpsdv+k++rlv+pk++ae++      ++e++  l++ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F +  g+  
  ONIVA02G30750.1  37 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldAASNEKGLLLSFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGvGEaA 130
                      89****************************55567889*************************************************6658889 PP

                      EE..EEEEE-S CS
               B3  89 efelvvkvfrk 99 
                      +++l++ ++r+
  ONIVA02G30750.1 131 RGRLFIDWRRR 141
                      999***99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEFITPIVRP ASAAAGGGEV QESGGRSLAA VEKEHMFDKV VTPSDVGKLN RLVIPKQHAE  60
KYFPLDAASN EKGLLLSFED RTGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKRLDAGDTV  120
SFGRGVGEAA RGRLFIDWRR RPDVVAALQP PTHRFAHHLP SSIPFAPWAH HHGHGAAAAA  180
AGARFLLPPS STPIYDHHRR HAHAVGYDAY AAATSRQVLF YRPLPPQQQH HPAVVLESVP  240
VRMTAGHAEP PSAPSKRVRL FGVNLDCANS EQDHAGVVRK TAPPPLPSPP SSSSSSSGKA  300
RCSLNLDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.12e-72B3 family protein