PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G31920.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GRF

Protein Properties

Length: 394aa MW: 41877.7 Da PI: 8.5535

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G31920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78	9.4e-25	125	169	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ ONIVA02G31920.1 125 DPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVET 169 79****************************************997 PP
2	QLQ	60.9	3.5e-21	64	99	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ ONIVA02G31920.1 64 PFTAAQYEELEQQALIYKYLVAGVPVPPDLVLPIRR 99 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MAMPYASLSP AVADHRSSPA AATASLLPFC RSTPLSAGGG VVAMGEDAPM TARWPPAAAA 60 RLPPFTAAQY EELEQQALIY KYLVAGVPVP PDLVLPIRRG LDSLAARFYN HPALGYGPYF 120 GKKLDPEPGR CRRTDGKKWR CSKEAAPDSK YCERHMHRGR NRSRKPVETQ LVAQSQPPSS 180 VVGSAAAPLA AASNGSSFQN HSLYPAIAGS NGGGGGRNMP SSFGSALGSQ LHMDNAAPYA 240 AVGGGTGKDL RYTAYGTRSL ADEQSQLITE AINTSIENPW RLLPSQNSPF PLSSYSQLGA 300 LSDLGQNTPS SLSKVQRQPL SFFGNDYAAV DSVKQENQTL RPFFDEWPKG RDSWSDLADE 360 NANLSSFSGT QLSISIPMAS SDFSAASSRS TNGD

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MAMPYASLSP AVADHRSSPA AATASLLPFC RSTPLSAGGG VVAMGEDAPM TARWPPAAAA  60
RLPPFTAAQY EELEQQALIY KYLVAGVPVP PDLVLPIRRG LDSLAARFYN HPALGYGPYF  120
GKKLDPEPGR CRRTDGKKWR CSKEAAPDSK YCERHMHRGR NRSRKPVETQ LVAQSQPPSS  180
VVGSAAAPLA AASNGSSFQN HSLYPAIAGS NGGGGGRNMP SSFGSALGSQ LHMDNAAPYA  240
AVGGGTGKDL RYTAYGTRSL ADEQSQLITE AINTSIENPW RLLPSQNSPF PLSSYSQLGA  300
LSDLGQNTPS SLSKVQRQPL SFFGNDYAAV DSVKQENQTL RPFFDEWPKG RDSWSDLADE  360
NANLSSFSGT QLSISIPMAS SDFSAASSRS TNGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-46	GRF family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G31920.1