PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G33680.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GeBP
Protein Properties Length: 290aa    MW: 30872 Da    PI: 10.5716
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G33680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57343.49.6e-1494182397
           DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                      +q+lw + De++lL G   f+a+ g  p   d+ a+++ +++s+s ++ +  +  K++rLK K+ +           + + +h++ + +l+ ++
  ONIVA02G33680.1  94 VQKLWGDADEVALLAGAAAFRARAGHVPRLpDMGALFDSIRGSLSPHIDQAKVYYKLKRLKGKYLHAAPG-------ASAGPHERRVRDLCASV 180
                      79************************77766**********************************99888.......67889999999999999 PP

           DUF573  96 Wg 97 
                      Wg
  ONIVA02G33680.1 181 WG 182
                      97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MPSKRPSQSA MDAGAAPASP SPPRSSKKRS SRPKPRAGDA ARHPAPNPSP PPAAAAPASS  60
RSRERERKRR QRGAFADPAA VTAPAAGGQH GGAVQKLWGD ADEVALLAGA AAFRARAGHV  120
PRLPDMGALF DSIRGSLSPH IDQAKVYYKL KRLKGKYLHA APGASAGPHE RRVRDLCASV  180
WGADLEPLAE GDDERAAAAA ADQPRTVPDA AAMLPVLTEM LDEYWKTDGR ALSSVSLAKG  240
LSLLGTEEAR FIEGKWRRQL DSEIQTQMRR HDLAKEVYAL LMDAIKALGP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16671ERKRRQ