PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G34000.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NF-YB

Protein Properties

Length: 186aa MW: 19720.1 Da PI: 8.3928

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G34000.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	136.1	1e-42	29	122	3	96
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +++++lP+an++r+mkkvlP++aki+ +ak+++++c++ef++fv++eas+k+++e+r+t++++d+l ++++lGf++yv+p+++y++ yre+e++ ONIVA02G34000.1 29 ATNAELPMANLVRLMKKVLPGKAKIGGAAKGLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDYLGSFGDLGFDRYVDPMDAYIHGYREFERA 122 68999**************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MAGNKKRGGR NMDQVEKAAV RSDGVGGSAT NAELPMANLV RLMKKVLPGK AKIGGAAKGL 60 THDCAVEFVG FVGDEASEKA KAEHRRTVAP EDYLGSFGDL GFDRYVDPMD AYIHGYREFE 120 RAGGNRRVAP PPPAAATPLT PGGPTFTDAE LQFLRSVIPS RSDDEYSGSS PAIGGYGYGY 180 GYGKNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	7e-22	NF-YB family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G34000.1