PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G34070.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 442aa    MW: 48553.4 Da    PI: 10.493
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G34070.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.0003190207219
                      HHHHHHHHHHHHHHHHHH CS
              HLH   2 rrahnerErrRRdriNsa 19 
                      r +h++ E+rRR +iN++
  ONIVA02G34070.3 190 RSKHSATEQRRRTKINDR 207
                      889*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MQLFQGEEPA HDFLSLRAGG GSSSPPFQHR EEQHSSHSSR GYGMEIRRSL RPLELAKQRG  60
RSSGNGTAAG SAVDGASPAG SDSEEHVLPG GVGTFSIRHA SGTPSREEAG SHGGVRRSAF  120
AFAPALHGAR MENAHETGGR SGSRAHRAPS TMWQDSAIDQ RSIGQTPYEA TRAEGRSSAS  180
SADQGPSTPR SKHSATEQRR RTKINDRQAS RGLKYFVNSC HTLIRRETKL LSFRRKSKSM  240
RKPIQKGITR IPNPCHGYYH SHAKVYYRSC WRNTKNTSQV QGEDLSPSTQ DMNNEQYGPK  300
HISAAQPALF NTQSVTSTTT SSSHMATGTP QNLEKNSTPS NQPPWLSMST MRQESEPGNK  360
MPNKHEKQTL HDENHSISSA YSQGLFNRLT EALKKSGLDP SQANIAVEIN LAKRARDNTS  420
DNSKINEDEE PIQITKRRCN KS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.13e-15bHLH family protein