PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G36080.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 1560aa MW: 174038 Da PI: 8.8924

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G36080.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.3	3.3e-19	1423	1475	33	85
-SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 ++ l +ed +g++W+++++ +++s++yvltkGW++Fv+++gL++gD++vF+ + ONIVA02G36080.2 1423 GVLLNFEDGEGKVWRFRYSCWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSGS 1475 56799*********************************************954 PP

Sequence ? help Back to Top
Protein Sequence Length: 1560 aa Download sequence
MYYVRGAGGS WEKAESEACV HESARRRGVP MDEKRAARTP RAGARNAVNG GESGCCSEKA 60 ARWGWRAPVE VAVVGFVATL TLLVLLYGGT GSLLSFTSPR TEFVRKLAAD KRGRRGWAAA 120 GGGVARGGGG AGDGRDGEDK CRPAMEAAEA GSMAWRTAVR GRQRSARTTV RPTVAGAIGA 180 ERRGQAGGGG EAGTMGMGGG LVSTFSRMLR SNRMLAGLRL RCTSDSGLVW WRNSSAVVIS 240 AEILNRWLHG IDGRRLQLHR AAAAASPSHG APEDTPESST RHDDDRLLGG LLSQAFDEHS 300 CRSRYTSSLY RRRSPFRPST YLVERLRRYE ARHKRCGPGS ALFQEAVEHL RSGRNAARSE 360 CQYVVWTPFN GLGNRMLALA STFLYALLTD RVLLVHAPPE FDGLFCEPFP GSSWTLPADF 420 LITDFDGVFT MWSPTSYKNM RQAGTISNAT AEQSLPAYVF LDLIQSFTDA AFCDDDQQVL 480 AKFNWMVIKS DVYFAAMLFL MPAYERELTQ LFPEKEAVFH HLARYLFHPS NDVWGIVHRF 540 YEAYLARADE LVGLQVRVFP EMPIPFDNMY EQIIRCSEQE GLLPKLGQTV VVTAANGSSV 600 VAPSTKLTSI LVTSLFPDYY DRIRGVYHAR PTETGEYVAV HQPSHEREQR TEARGHNQRA 660 LAEIYLLSFC DRVVTSAVST FGYIAHGLAG VRPWVLLRPP SPVARAEPAC VRSETVEPCL 720 QALPRRMCGA AEGSDIGALV PHIRHCEDVQ KGVKLGWPPA GRAAENEARR WGRLRRASAR 780 AALVLCSLTM IPVVVVLHRC AVSSSWPDRV FEAKHIAGAG EQDMQDDLPD DLTASQYIGY 840 DKFLGGLLQE GFDEVSCRSR YQFARYHKNF TRIPSSYLLE RLRRQEALQK KCGPGTKSYK 900 QAVKLLRSSQ GVNMTTDCNY LFLTVHAGLG NRMLEIASAF LYALLTNRIL LLDRYQEIGD 960 LFCEPFPGTS WLMPSDFPLN YGEFTQSSPE SYGNMQQNKV VGDNTDRSLA GFRPPYVFLY 1020 LDGNYEFHDK LFFCEDDQQF LQDVPWLIMR TDMYFIPSLF LIPSYQDELS RLFPEKDAVF 1080 HHLARYLFHP TNSIWYSVKG YYRSYLAKAN KTVGIQIRIF EKEGILQKNG RFPYVLEQIL 1140 SCAQNEKLLP EISMKDEAEA PTATKNNQTI AVLTTSLSSW YSDQIQKKYS EHPTVDGTRV 1200 EVYQPSHEEY QRSKNKKHNM KALAEIYLLS MTDVLITSGF STFGYAAQGL SGLTPWIMFR 1260 SENHAMPDPP CRRAMSIEPC FHQAPFYDCK AKRNADLGKM VPFVRHCEDV SWGLKVVLAA 1320 KSQMGVWEAE LVGKGSEIGL AITLLPLLAV FLLGENVRLA VNDFAKAHQP AGTSDTNTSA 1380 FRRRQAQPPA GAQAARGEAL PAAADELRRL RHRRRGHLQL CKGVLLNFED GEGKVWRFRY 1440 SCWNSSQSYV LTKGWSRFVR EKGLRAGDTI VFSGSAYGPD KLLFIDCKKN NTAAATGDEK 1500 PITSGEATRV VRLFGMDITG GGGDCRKRER AVEMGQEAFL MKRQCVHSTP HYTVRSAKAI

Sequence ? help Back to Top

Protein Sequence Length: 1560 aa Download sequence

MYYVRGAGGS WEKAESEACV HESARRRGVP MDEKRAARTP RAGARNAVNG GESGCCSEKA  60
ARWGWRAPVE VAVVGFVATL TLLVLLYGGT GSLLSFTSPR TEFVRKLAAD KRGRRGWAAA  120
GGGVARGGGG AGDGRDGEDK CRPAMEAAEA GSMAWRTAVR GRQRSARTTV RPTVAGAIGA  180
ERRGQAGGGG EAGTMGMGGG LVSTFSRMLR SNRMLAGLRL RCTSDSGLVW WRNSSAVVIS  240
AEILNRWLHG IDGRRLQLHR AAAAASPSHG APEDTPESST RHDDDRLLGG LLSQAFDEHS  300
CRSRYTSSLY RRRSPFRPST YLVERLRRYE ARHKRCGPGS ALFQEAVEHL RSGRNAARSE  360
CQYVVWTPFN GLGNRMLALA STFLYALLTD RVLLVHAPPE FDGLFCEPFP GSSWTLPADF  420
LITDFDGVFT MWSPTSYKNM RQAGTISNAT AEQSLPAYVF LDLIQSFTDA AFCDDDQQVL  480
AKFNWMVIKS DVYFAAMLFL MPAYERELTQ LFPEKEAVFH HLARYLFHPS NDVWGIVHRF  540
YEAYLARADE LVGLQVRVFP EMPIPFDNMY EQIIRCSEQE GLLPKLGQTV VVTAANGSSV  600
VAPSTKLTSI LVTSLFPDYY DRIRGVYHAR PTETGEYVAV HQPSHEREQR TEARGHNQRA  660
LAEIYLLSFC DRVVTSAVST FGYIAHGLAG VRPWVLLRPP SPVARAEPAC VRSETVEPCL  720
QALPRRMCGA AEGSDIGALV PHIRHCEDVQ KGVKLGWPPA GRAAENEARR WGRLRRASAR  780
AALVLCSLTM IPVVVVLHRC AVSSSWPDRV FEAKHIAGAG EQDMQDDLPD DLTASQYIGY  840
DKFLGGLLQE GFDEVSCRSR YQFARYHKNF TRIPSSYLLE RLRRQEALQK KCGPGTKSYK  900
QAVKLLRSSQ GVNMTTDCNY LFLTVHAGLG NRMLEIASAF LYALLTNRIL LLDRYQEIGD  960
LFCEPFPGTS WLMPSDFPLN YGEFTQSSPE SYGNMQQNKV VGDNTDRSLA GFRPPYVFLY  1020
LDGNYEFHDK LFFCEDDQQF LQDVPWLIMR TDMYFIPSLF LIPSYQDELS RLFPEKDAVF  1080
HHLARYLFHP TNSIWYSVKG YYRSYLAKAN KTVGIQIRIF EKEGILQKNG RFPYVLEQIL  1140
SCAQNEKLLP EISMKDEAEA PTATKNNQTI AVLTTSLSSW YSDQIQKKYS EHPTVDGTRV  1200
EVYQPSHEEY QRSKNKKHNM KALAEIYLLS MTDVLITSGF STFGYAAQGL SGLTPWIMFR  1260
SENHAMPDPP CRRAMSIEPC FHQAPFYDCK AKRNADLGKM VPFVRHCEDV SWGLKVVLAA  1320
KSQMGVWEAE LVGKGSEIGL AITLLPLLAV FLLGENVRLA VNDFAKAHQP AGTSDTNTSA  1380
FRRRQAQPPA GAQAARGEAL PAAADELRRL RHRRRGHLQL CKGVLLNFED GEGKVWRFRY  1440
SCWNSSQSYV LTKGWSRFVR EKGLRAGDTI VFSGSAYGPD KLLFIDCKKN NTAAATGDEK  1500
PITSGEATRV VRLFGMDITG GGGDCRKRER AVEMGQEAFL MKRQCVHSTP HYTVRSAKAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13260.1	5e-27	RAV family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G36080.2