PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G36080.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 1504aa MW: 168500 Da PI: 8.1495

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G36080.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.4	3.2e-19	1367	1419	33	85
-SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 ++ l +ed +g++W+++++ +++s++yvltkGW++Fv+++gL++gD++vF+ + ONIVA02G36080.3 1367 GVLLNFEDGEGKVWRFRYSCWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSGS 1419 56799*********************************************954 PP

Sequence ? help Back to Top
Protein Sequence Length: 1504 aa Download sequence
MYYVRGAGGS WEKAESEACV HESARRRGVP MDEKRAARTP RAGARNAVNG GESGCCSEKA 60 ARWGWRAPVE VAVVGFVATL TLLVLLYGGT GSLLSFTSPR TEFVRKLAAA AASPSHGAPE 120 DTPESSTRHD DDRLLGGLLS QAFDEHSCRS RYTSSLYRRR SPFRPSTYLV ERLRRYEARH 180 KRCGPGSALF QEAVEHLRSG RNAARSECQY VVWTPFNGLG NRMLALASTF LYALLTDRVL 240 LVHAPPEFDG LFCEPFPGSS WTLPADFLIT DFDGVFTMWS PTSYKNMRQA GTISNATAEQ 300 SLPAYVFLDL IQSFTDAAFC DDDQQVLAKF NWMVIKSDVY FAAMLFLMPA YERELTQLFP 360 EKEAVFHHLA RYLFHPSNDV WGIVHRFYEA YLARADELVG LQVRVFPEMP IPFDNMYEQI 420 IRCSEQEGLL PKLGQTVVVT AANGSSVVAP STKLTSILVT SLFPDYYDRI RGVYHARPTE 480 TGEYVAVHQP SHEREQRTEA RGHNQRALAE IYLLSFCDRV VTSAVSTFGY IAHGLAGVRP 540 WVLLRPPSPV ARAEPACVRS ETVEPCLQAL PRRMCGAAEG SDIGALVPHI RHCEDVQKGV 600 KLGWPPAGRA AENEARRWGR LRRASARAAL VLCSLTMIPV VVVLHRCAVS SSWPDRVFEA 660 KHIAGAGEQA LPIETHMERS GGGGADGDEE RLPLHHGFET ERAAPWAAAE SKPPPPPRGR 720 FGRASVRAAL AVCFLAIPAV LLLQRWQAGS SPEWLFEIEP PADGDRDMQD DLPDDLTASQ 780 YIGYDKFLGG LLQEGFDEVS CRSRYQFARY HKNFTRIPSS YLLERLRRQE ALQKKCGPGT 840 KSYKQAVKLL RSSQGVNMTT DCNYLFLTVH AGLGNRMLEI ASAFLYALLT NRILLLDRYQ 900 EIGDLFCEPF PGTSWLMPSD FPLNYGEFTQ SSPESYGNMQ QNKVVGDNTD RSLAGFRPPY 960 VFLYLDGNYE FHDKLFFCED DQQFLQDVPW LIMRTDMYFI PSLFLIPSYQ DELSRLFPEK 1020 DAVFHHLARY LFHPTNSIWY SVKGYYRSYL AKANKTVGIQ IRIFEKEGIL QKNGRFPYVL 1080 EQILSCAQNE KLLPEISMKD EAEAPTATKN NQTIAVLTTS LSSWYSDQIQ KKYSEHPTVD 1140 GTRVEVYQPS HEEYQRSKNK KHNMKALAEI YLLSMTDVLI TSGFSTFGYA AQGLSGLTPW 1200 IMFRSENHAM PDPPCRRAMS IEPCFHQAPF YDCKAKRNAD LGKMVPFVRH CEDVSWGLKV 1260 VLAAKSQMGV WEAELVGKGS EIGLAITLLP LLAVFLLGEN VRLAVNDFAK AHQPAGTSDT 1320 NTSAFRRRQA QPPAGAQAAR GEALPAAADE LRRLRHRRRG HLQLCKGVLL NFEDGEGKVW 1380 RFRYSCWNSS QSYVLTKGWS RFVREKGLRA GDTIVFSGSA YGPDKLLFID CKKNNTAAAT 1440 GDEKPITSGE ATRVVRLFGM DITGGGGDCR KRERAVEMGQ EAFLMKRQCV HSTPHYTVRS 1500 AKAI

Sequence ? help Back to Top

Protein Sequence Length: 1504 aa Download sequence

MYYVRGAGGS WEKAESEACV HESARRRGVP MDEKRAARTP RAGARNAVNG GESGCCSEKA  60
ARWGWRAPVE VAVVGFVATL TLLVLLYGGT GSLLSFTSPR TEFVRKLAAA AASPSHGAPE  120
DTPESSTRHD DDRLLGGLLS QAFDEHSCRS RYTSSLYRRR SPFRPSTYLV ERLRRYEARH  180
KRCGPGSALF QEAVEHLRSG RNAARSECQY VVWTPFNGLG NRMLALASTF LYALLTDRVL  240
LVHAPPEFDG LFCEPFPGSS WTLPADFLIT DFDGVFTMWS PTSYKNMRQA GTISNATAEQ  300
SLPAYVFLDL IQSFTDAAFC DDDQQVLAKF NWMVIKSDVY FAAMLFLMPA YERELTQLFP  360
EKEAVFHHLA RYLFHPSNDV WGIVHRFYEA YLARADELVG LQVRVFPEMP IPFDNMYEQI  420
IRCSEQEGLL PKLGQTVVVT AANGSSVVAP STKLTSILVT SLFPDYYDRI RGVYHARPTE  480
TGEYVAVHQP SHEREQRTEA RGHNQRALAE IYLLSFCDRV VTSAVSTFGY IAHGLAGVRP  540
WVLLRPPSPV ARAEPACVRS ETVEPCLQAL PRRMCGAAEG SDIGALVPHI RHCEDVQKGV  600
KLGWPPAGRA AENEARRWGR LRRASARAAL VLCSLTMIPV VVVLHRCAVS SSWPDRVFEA  660
KHIAGAGEQA LPIETHMERS GGGGADGDEE RLPLHHGFET ERAAPWAAAE SKPPPPPRGR  720
FGRASVRAAL AVCFLAIPAV LLLQRWQAGS SPEWLFEIEP PADGDRDMQD DLPDDLTASQ  780
YIGYDKFLGG LLQEGFDEVS CRSRYQFARY HKNFTRIPSS YLLERLRRQE ALQKKCGPGT  840
KSYKQAVKLL RSSQGVNMTT DCNYLFLTVH AGLGNRMLEI ASAFLYALLT NRILLLDRYQ  900
EIGDLFCEPF PGTSWLMPSD FPLNYGEFTQ SSPESYGNMQ QNKVVGDNTD RSLAGFRPPY  960
VFLYLDGNYE FHDKLFFCED DQQFLQDVPW LIMRTDMYFI PSLFLIPSYQ DELSRLFPEK  1020
DAVFHHLARY LFHPTNSIWY SVKGYYRSYL AKANKTVGIQ IRIFEKEGIL QKNGRFPYVL  1080
EQILSCAQNE KLLPEISMKD EAEAPTATKN NQTIAVLTTS LSSWYSDQIQ KKYSEHPTVD  1140
GTRVEVYQPS HEEYQRSKNK KHNMKALAEI YLLSMTDVLI TSGFSTFGYA AQGLSGLTPW  1200
IMFRSENHAM PDPPCRRAMS IEPCFHQAPF YDCKAKRNAD LGKMVPFVRH CEDVSWGLKV  1260
VLAAKSQMGV WEAELVGKGS EIGLAITLLP LLAVFLLGEN VRLAVNDFAK AHQPAGTSDT  1320
NTSAFRRRQA QPPAGAQAAR GEALPAAADE LRRLRHRRRG HLQLCKGVLL NFEDGEGKVW  1380
RFRYSCWNSS QSYVLTKGWS RFVREKGLRA GDTIVFSGSA YGPDKLLFID CKKNNTAAAT  1440
GDEKPITSGE ATRVVRLFGM DITGGGGDCR KRERAVEMGQ EAFLMKRQCV HSTPHYTVRS  1500
AKAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13260.1	4e-27	RAV family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G36080.3