PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G36550.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NF-YA
Protein Properties Length: 307aa    MW: 33507.4 Da    PI: 11.3369
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G36550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.71.6e-32134190158
        CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      d p+YVN+KQy++Il+RRq Rakle+++kl  k+rkpylheSRh+hA++R+Rg+gGrF
  ONIVA02G36550.1 134 DGPIYVNPKQYHGILRRRQLRAKLEAQNKL-VKTRKPYLHESRHRHAMKRARGTGGRF 190
                      57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MQSRGAAAEA TAGRSRGGCR RSEQQQLLRA AEAPREEARG SHASPLIVFL FLRLQRRTVD  60
GPMRSTLTFD NNHSVVPSQN IDYGQPMACI SYPYNDSGSG VWASYSSRSV FHSQIVGGGT  120
SPRVPLPSLE IADDGPIYVN PKQYHGILRR RQLRAKLEAQ NKLVKTRKPY LHESRHRHAM  180
KRARGTGGRF LNTKQLQLQQ QSHTTSTKTT TDSQNSSGSV HLRLGGGAIG DQTPFPFKAM  240
DSQANIKRAA ASASTFTVTS AAQKDDAFFD RHGHHLSSFS GHFGQASAQG GVGSMHNGSQ  300
QRVPAMR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175184RHRHAMKRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-30NF-YA family protein