PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G37880.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 262aa    MW: 26226.9 Da    PI: 7.0418
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G37880.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.73.6e-07222248531
                      HHHHHHHHHHHHHHHHHHHHCTSCCC. CS
              HLH   5 hnerErrRRdriNsafeeLrellPkas 31 
                      h+++Er RR+ri +++  L+el+P+a 
  ONIVA02G37880.3 222 HSIAERLRRERIAERMKALQELVPNAN 248
                      99***********************74 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MQPNARQMHD GGGGGGGGQD DFFDQMLSTL PAVWSELGSG KPAWDLTAGA VGGGGGASDD  60
HSAAAFDDSA LLASRLRQHQ IDGGGDKPIM LQLSDLHRHH GLAAGDDSGG AAGFLPLSLF  120
ADRSQDDIDA AFKSPNGARG DHALYNGFGA AGMHGAAAMQ PPPFGQGGSM PAQSFGGGAA  180
ASGGGGGSAS AAAAAGASSG GGAAAPPRQR QRARRGQATD PHSIAERLRR ERIAERMKAL  240
QELVPNANKA VVGKGRSDMM PK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227232RLRRER