PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G37950.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ARR-B
Protein Properties Length: 668aa    MW: 71976 Da    PI: 6.597
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G37950.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like28.33.9e-09214239127
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekA 27 
                      kpr++W+ eLH++Fv av+qL G++  
  ONIVA02G37950.1 214 KPRVVWSVELHRKFVAAVNQL-GIDTC 239
                      79*******************.77665 PP
2Response_reg76.69.3e-26261341109
                      EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS
     Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealka 92 
                      vl vdD+p+ +++l+++l + +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge +++l+ +  
  ONIVA02G37950.1  26 VLAVDDDPVCLKVLETLLLRCQY-HVTTTNQAAIALKMLRENRdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKTVLKGITH 117
                      799********************.***************99999********************87754.558********************* PP

                      TESEEEESS--HHHHHH CS
     Response_reg  93 GakdflsKpfdpeelvk 109
                      Ga d+l Kp+ +eel++
  ONIVA02G37950.1 118 GACDYLLKPVRIEELRN 134
                      ***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    
MRAAEERKGV VPAARRRDQF PVGMRVLAVD DDPVCLKVLE TLLLRCQYHV TTTNQAAIAL  60
KMLRENRDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSVNGETKT VLKGITHGAC  120
DYLLKPVRIE ELRNIWQHVI RRKFSTRDRA NLDFYEECNK PPNADSDHVH GHVTCGSPDQ  180
SGRPSKKRKE YCSEEEDEGE VNTQDIDDPS APKKPRVVWS VELHRKFVAA VNQLGIDTCT  240
GNDKYRLYLK RLSAVASQQV SIVAALGGRD PFLHMGGFEG LQGYQAFTSS SALSSFTPHG  300
LLNSPRNNPA ALGTQGVPAS KSIQTMSGSH TLSHSINDAN KYHLSLPGNQ KGNLGQGLAT  360
SLGQTQMQQK WIHEETDDLS TILSGNGLSN GMSGTLQSVT SSPLLPQELA ECTQAKIVSQ  420
PSIRTSSVSS EHIEGAVGVS SGLLESRVSQ QSTIPLSGFS ANGLLIHGSF NNTCANKLGG  480
TSSSCAPARS SNDLMVARDT KGGASSFGGA MLLPPDTEQK YLNFGGGNGL KQKFDDRTAD  540
SLFDPKFVWS SVPSSQLASN IGAHHAMSQR WNNSSSNSSN IGARMIGQAT SSGSTVIPQM  600
KTDFLVSGDM AMPKNASDLS IPKLQSELSS SSCSFDGLLN SIVKVEKDDV TFSDDLGCGD  660
FYSLGACI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-82ARR-B family protein