PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G39130.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 763aa MW: 82693.8 Da PI: 5.2328

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G39130.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.2	2.3e-11	590	638	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + +k Ka++L + ++Y++sLq ONIVA02G39130.3 590 NSHSLAERFRREKINERMKLLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 638 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MKLRLRSMDQ RGGAGGAAET HRVQLPDTAT LSDVKAFLAT KLSAAQPVPA ESVRLTLNRS 60 EELLTPDPSA TLPALGLASG DLLYFTLSPL PSPSPPPQPQ PQAQPLPRNP NPDVPSIAGA 120 ADPTKSPVES GSSSSMPQAL CTNPGLPVAS DPHHPPPDVV MAEAFAVIKS KSSLVVGATK 180 REMENVGGAD GTVICRLVVA LHAALLDAGF LYANPVGSCL QLPQSGSFVP VSMKYTLPEL 240 VEALPAVEEG MVAVLNYSLM GNFMMVYGHV PGATSGVRRL CLELPELAPL LYLDSDEVST 300 AEEREIHELW RVLKDEMCLP LMISLCQLNN LSLPPCLMAL PGDVKAKVLE FVPGVDLARV 360 QCTCKELRDL AADDNLWKKK CEMEFNTQDT CGCMMCKCIY SDQRKDIVLA DKYTCGNYMQ 420 KPVSQPGRWL IILVYHSLLC QYITIGLSLL WYHLVDLVQM YSPPCSAAAS SQGHCFAVGA 480 NQLASLDLAM DFDEPILFPV HNASLQEGIQ FYNPTGDTQL SRNMSIDKCL KGSKRKGSGE 540 GSSSLHSQEE TGEMPQRELS MEHAGEKAGD ADASREEYVH VRAKRGQATN SHSLAERFRR 600 EKINERMKLL QDLVPGCNKI TGKAMMLDEI INYVQSLQRQ VEFLSMKLST ISPELNSDLD 660 LQDILCSQDA RSAFLGCSPQ LSNAHPNLYR AAQQCLSPPG LYGSVCVPNP ADVHLARAGH 720 LASFPQQRGL IWNEELRNIA PAGFASDAAG TSSLENSDSM KVE

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MKLRLRSMDQ RGGAGGAAET HRVQLPDTAT LSDVKAFLAT KLSAAQPVPA ESVRLTLNRS  60
EELLTPDPSA TLPALGLASG DLLYFTLSPL PSPSPPPQPQ PQAQPLPRNP NPDVPSIAGA  120
ADPTKSPVES GSSSSMPQAL CTNPGLPVAS DPHHPPPDVV MAEAFAVIKS KSSLVVGATK  180
REMENVGGAD GTVICRLVVA LHAALLDAGF LYANPVGSCL QLPQSGSFVP VSMKYTLPEL  240
VEALPAVEEG MVAVLNYSLM GNFMMVYGHV PGATSGVRRL CLELPELAPL LYLDSDEVST  300
AEEREIHELW RVLKDEMCLP LMISLCQLNN LSLPPCLMAL PGDVKAKVLE FVPGVDLARV  360
QCTCKELRDL AADDNLWKKK CEMEFNTQDT CGCMMCKCIY SDQRKDIVLA DKYTCGNYMQ  420
KPVSQPGRWL IILVYHSLLC QYITIGLSLL WYHLVDLVQM YSPPCSAAAS SQGHCFAVGA  480
NQLASLDLAM DFDEPILFPV HNASLQEGIQ FYNPTGDTQL SRNMSIDKCL KGSKRKGSGE  540
GSSSLHSQEE TGEMPQRELS MEHAGEKAGD ADASREEYVH VRAKRGQATN SHSLAERFRR  600
EKINERMKLL QDLVPGCNKI TGKAMMLDEI INYVQSLQRQ VEFLSMKLST ISPELNSDLD  660
LQDILCSQDA RSAFLGCSPQ LSNAHPNLYR AAQQCLSPPG LYGSVCVPNP ADVHLARAGH  720
LASFPQQRGL IWNEELRNIA PAGFASDAAG TSSLENSDSM KVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-45	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G39130.3