PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G40500.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 607aa MW: 66776.8 Da PI: 4.4461

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G40500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.9	2e-49	16	152	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkya.........tgkrknratksgyW 83 l+pGfrFhPtdeelv++yL++++ g++l++ ++i+evd+y++ePwdLp +++++++ +wyfF++ d+k + g+r+nrat +gyW ONIVA02G40500.1 16 LAPGFRFHPTDEELVSYYLRRRILGRRLRI-DAIAEVDLYRLEPWDLPslSRIRSRDAQWYFFARLDRKVTgagaggrggPGNRTNRATPRGYW 108 579*************************.99***********5448999999*******99777777665567******* PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k+tgkd++v++ +g+lvg+kktLvf++grapkg++t+Wvmheyrl ONIVA02G40500.1 109 KTTGKDRDVHH-RGKLVGMKKTLVFHSGRAPKGQRTNWVMHEYRL 152 *******.999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MSQSPPDSSS AAAVPLAPGF RFHPTDEELV SYYLRRRILG RRLRIDAIAE VDLYRLEPWD 60 LPSLSRIRSR DAQWYFFARL DRKVTGAGAG GRGGPGNRTN RATPRGYWKT TGKDRDVHHR 120 GKLVGMKKTL VFHSGRAPKG QRTNWVMHEY RLLDADGTQD LHVVCRIFQK NGSGPQNGAQ 180 YGAPYLEEDW EEEDDAIENM PASGAFAEMA ATQEYQPEIT PVKAQGSNEE TNGGGYSCDV 240 FSLDEILQGP ENVCKNEEQN AIDDKFTIAE LSGYPRQDDG YVGENGSVNW IDPSNGDNTN 300 WPLRAYSTQN HVNGTLSADG FFDTVNGTNS YSGPSDNQNL YLQDDGLTSS HQVGDNMPFY 360 DASSNHKWVD GKDDYLNLND LLYPPAENQP LFDAGDDLMA YFDATEDDFK FDIMGTEDSN 420 SQLPDMSNFV QKDDNNNKFT LDGISNTALY GASSSGSHGN MYPDTAVPDM PMDDTVDKSF 480 GKRLASMLGS IPAPPAMASE FPPSTGKSVV PLSAVNPSSS IRVTAGIIQL GGITFTGSTE 540 RMQKNGDFNL LLSFTVEGDV STKSIGFEPD TQMSTTPMVL RSGMYLFFVS AMILMLSYKV 600 GLCIYSR

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MSQSPPDSSS AAAVPLAPGF RFHPTDEELV SYYLRRRILG RRLRIDAIAE VDLYRLEPWD  60
LPSLSRIRSR DAQWYFFARL DRKVTGAGAG GRGGPGNRTN RATPRGYWKT TGKDRDVHHR  120
GKLVGMKKTL VFHSGRAPKG QRTNWVMHEY RLLDADGTQD LHVVCRIFQK NGSGPQNGAQ  180
YGAPYLEEDW EEEDDAIENM PASGAFAEMA ATQEYQPEIT PVKAQGSNEE TNGGGYSCDV  240
FSLDEILQGP ENVCKNEEQN AIDDKFTIAE LSGYPRQDDG YVGENGSVNW IDPSNGDNTN  300
WPLRAYSTQN HVNGTLSADG FFDTVNGTNS YSGPSDNQNL YLQDDGLTSS HQVGDNMPFY  360
DASSNHKWVD GKDDYLNLND LLYPPAENQP LFDAGDDLMA YFDATEDDFK FDIMGTEDSN  420
SQLPDMSNFV QKDDNNNKFT LDGISNTALY GASSSGSHGN MYPDTAVPDM PMDDTVDKSF  480
GKRLASMLGS IPAPPAMASE FPPSTGKSVV PLSAVNPSSS IRVTAGIIQL GGITFTGSTE  540
RMQKNGDFNL LLSFTVEGDV STKSIGFEPD TQMSTTPMVL RSGMYLFFVS AMILMLSYKV  600
GLCIYSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-69	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G40500.1