PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G04550.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 202aa    MW: 22704.7 Da    PI: 8.0001
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G04550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.21.9e-101281843694
                      EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
               B3  36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      ++ +  + +s++++l+ r k++r +lt+GW++  +a+  +egD+++F++++ ++  lv+
  ONIVA03G04550.1 128 MVSMAGTTQSYQMRLK-RSKDSRAMLTTGWNQLIDAKAFDEGDVCLFHFKEVDD-VLVL 184
                      3334456799999993.4444459************************876433.2444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MEGGQAVLGT AGASAARRCG RLHGCRRARG GTASSEQCSV PTRVAEVSCG QYGPRTFSGF  60
DKYCWYGNDV TLTKSMHLQI AHVAAVNFAE DSTLRVHCQE NPYDQCENVQ FSERYINKYI  120
GSPIDDLMVS MAGTTQSYQM RLKRSKDSRA MLTTGWNQLI DAKAFDEGDV CLFHFKEVDD  180
VLVLKITQLR HFFGMHYNYP KY