PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G04550.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 169aa    MW: 19453.8 Da    PI: 4.9766
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G04550.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.81.3e-10941513594
                      EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
               B3  35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       ++ +  + +s++++l+ r k++r +lt+GW++  +a+  +egD+++F++++ ++  lv+
  ONIVA03G04550.2  94 LMVSMAGTTQSYQMRLK-RSKDSRAMLTTGWNQLIDAKAFDEGDVCLFHFKEVDD-VLVL 151
                      33334456799999993.4444459************************876433.2444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MGDGNEVIDI SSDSDDGQYG PRTFSGFDKY CWYGNDVTLT KSMHLQIAHV AAVNFAEDST  60
LRVHCQENPY DQCENVQFSE RYINKYIGSP IDDLMVSMAG TTQSYQMRLK RSKDSRAMLT  120
TGWNQLIDAK AFDEGDVCLF HFKEVDDVLV LKITQLRHFF GMHYNYPKY