PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G05390.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NF-YA
Protein Properties Length: 280aa    MW: 30926.5 Da    PI: 8.2562
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G05390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA106.62e-33178234158
        CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      +ep+YVNaKQy++Il+RRq Rakle+e+kl  k+rkpylheSRh+hA++R+Rg+gGrF
  ONIVA03G05390.1 178 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKNRKPYLHESRHQHAMKRARGTGGRF 234
                      69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MAKASIQAEE REKERGFALA EERSKVRSEE AAREEVCRRG DMLPPHLTEN GTVMIQFGHK  60
MPDYESSATQ STSGSPREVS GMSEGSLNEQ NDQSGNLDGY TKSDEGKMMS ALSLGKSETV  120
YAHSEPDCSQ PFGISYPYAD SFYGGAVATY GTHAIMHPQI VGVMSSSRVP LPIEPATEEP  180
IYVNAKQYHA ILRRRQLRAK LEAENKLVKN RKPYLHESRH QHAMKRARGT GGRFLNTKQQ  240
PEASDGGTPR LVSANGVVFS KHEHSLSSSD LHHRRAKEGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14020.12e-44NF-YA family protein