PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G05710.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HSF
Protein Properties Length: 300aa    MW: 33525.4 Da    PI: 6.3506
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G05710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.41.5e-35321242103
                      HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS
     HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 
                      Fl+k+y++++d+++++++sw e++ +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F+kg k+ll+
  ONIVA03G05710.1  32 FLSKTYQLVDDPSTDDVVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEFANEFFRKGAKHLLS 116
                      9****************************************************************999.........***************** PP

                      XXXXXXXX CS
     HSF_DNA-bind  96 kikrkkse 103
                      +i+r+ks+
  ONIVA03G05710.1 117 EIHRRKSS 124
                      *****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MAFLVERCGG EMVVSMERSH GRSTTTAAPA PFLSKTYQLV DDPSTDDVVS WGEDEATFVV  60
WRPPEFARDL LPNYFKHNNF SSFVRQLNTY GFRKIVADRW EFANEFFRKG AKHLLSEIHR  120
RKSSSCSQPQ PPPPFPMHQH YPLSLFSPPT TTRSPPVGAA AAAAYHFQEE YCSSPADYAG  180
GGGDLLAALS EDNRQLRRRN SLLLSELAHM RKLYNDIIYF LQNHVEPVAP PPLAAATSCR  240
LVELGPSTTE RRRSAASPSG DNDDDAAVRL FGVRLDDDHG KKRRVQLVQE DEGDEQGSEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.12e-69HSF family protein