PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G07570.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 313aa MW: 32547.5 Da PI: 8.1003

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G07570.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.7	1.4e-15	168	214	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++ErrRR++iN++f eL +++P + kK++Ka+iL Av+Y+k+Lq ONIVA03G07570.1 168 DHIIAERRRREKINQRFIELSTVIPGL-----KKMDKATILGDAVKYVKELQ 214 5999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MDDSSFFMQW AMDTLHQLPS DSTAAAYATD VAGDAFPSLQ ALRNASAAGG GGGGFRDLTV 60 QVDQVHRANS WSSSDSPGGA AATAAAGWSP HVTGGGGGGG RGHRPMSWNF SAASAQPTTE 120 DSGGGGGGGV VPAPPQAMET ETATARAAPV KKGGGGSSSA AAPGYVQDHI IAERRRREKI 180 NQRFIELSTV IPGLKKMDKA TILGDAVKYV KELQEKVKTL EEEDGGRAAA MVVRKSSCSG 240 RQCDGEGRGS RVPEMEVRVW ERSVLVRVQC GNARGLLVRL LSEVEELRLA ITHTSVMPFP 300 ASTVIITITA KAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	178	ERRRRE
2	174	179	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-31	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G07570.1