PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G08950.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 539aa    MW: 60246.6 Da    PI: 8.2517
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G08950.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.62.3e-182913771199
                      HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      +++  l lp kfa+e g  + ++  l++  e  r W+vk+  +  sg ++l++GW+eF++a++L++g f++F++dg   f  +v+vf++
  ONIVA03G08950.1 291 SSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAF--TVTVFDE 377
                      455669**********999999999***************77999999**************************998888..9999986 PP
2B346.28e-154405121487
                      T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      + l +p +f e+h++  +e  +++l   +g+ W+v+l++  r +++r+ ++ GW +F+ +ngL +gD++ F++ ++
  ONIVA03G08950.1 440 QYLNVPMEFQEAHEYARRE--KVVL-RMRGEAWTVRLKHsrRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLRE 512
                      55889********988554..4555.5599*******9876667777************************96654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MGCCSSRSAD SPASRVTRWR STGIVALRDA RLKVVPNEVL QVGNSLRILD LTNNKIAEIP  60
QEVGTLVNMQ RLVLAGNLVE SIPANIGYLR NLKILTLDRN KISVLPEELG SLSNLQQLSI  120
SQNSLSRLPK SVGDLRNMLL LNVSDNKLIA LPESIGGCSS LEELQANGNS IEDVPSSICN  180
LVCLKSLSLN GNRICQLPQN LLKDCKALQN ISLHDNPISM DQFQQMDGFT EFEARRRKKF  240
DKQIDSNVMM TLAHSACCPD LLQILAQRME DQMANLRLTD FEFFRIILPG SSKTKLKLPY  300
KFARELGDRE LREARLRVAG EGRRPWDVKV FDDDVSGDVY LGRGWQEFAR AHDLRDGHFL  360
IFRYDGAAAF TVTVFDETMC RRDYRRHHDA AGTGSSSSSD SSDAAAAAAA TAAAEGVGDV  420
ALSQFAVTLR QCNLEDKQAQ YLNVPMEFQE AHEYARREKV VLRMRGEAWT VRLKHSRRER  480
GQRTAFRYGW HRFCVDNGLA VGDTCFFRVL REGDLRRGGA ADDHVLKVAV RKADGTTLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.11e-18B3 family protein