PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G08950.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 525aa    MW: 58532.7 Da    PI: 8.0123
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G08950.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.72.2e-182913771199
                      HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      +++  l lp kfa+e g  + ++  l++  e  r W+vk+  +  sg ++l++GW+eF++a++L++g f++F++dg   f  +v+vf++
  ONIVA03G08950.2 291 SSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAF--TVTVFDE 377
                      455669**********999999999***************77999999**************************998888..9999986 PP
2B346.37.7e-154264981487
                      T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      + l +p +f e+h++  +e  +++l   +g+ W+v+l++  r +++r+ ++ GW +F+ +ngL +gD++ F++ ++
  ONIVA03G08950.2 426 QYLNVPMEFQEAHEYARRE--KVVL-RMRGEAWTVRLKHsrRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLRE 498
                      55889********988554..4555.5599*******9876667777************************96654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    
MGCCSSRSAD SPASRVTRWR STGIVALRDA RLKVVPNEVL QVGNSLRILD LTNNKIAEIP  60
QEVGTLVNMQ RLVLAGNLVE SIPANIGYLR NLKILTLDRN KISVLPEELG SLSNLQQLSI  120
SQNSLSRLPK SVGDLRNMLL LNVSDNKLIA LPESIGGCSS LEELQANGNS IEDVPSSICN  180
LVCLKSLSLN GNRICQLPQN LLKDCKALQN ISLHDNPISM DQFQQMDGFT EFEARRRKKF  240
DKQIDSNVMM TLAHSACCPD LLQILAQRME DQMANLRLTD FEFFRIILPG SSKTKLKLPY  300
KFARELGDRE LREARLRVAG EGRRPWDVKV FDDDVSGDVY LGRGWQEFAR AHDLRDGHFL  360
IFRYDGAAAF TVTVFDETIG SSSSSDSSDA AAAAAATAAA EGVGDVALSQ FAVTLRQCNL  420
EDKQAQYLNV PMEFQEAHEY ARREKVVLRM RGEAWTVRLK HSRRERGQRT AFRYGWHRFC  480
VDNGLAVGDT CFFRVLREGD LRRGGAADDH VLKVAVRKAD GTTLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.12e-16B3 family protein