PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G08950.4
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 271aa    MW: 30745.5 Da    PI: 8.3307
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G08950.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.36.8e-19231091199
                      HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      +++  l lp kfa+e g  + ++  l++  e  r W+vk+  +  sg ++l++GW+eF++a++L++g f++F++dg   f  +v+vf++
  ONIVA03G08950.4  23 SSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAF--TVTVFDE 109
                      455669**********999999999***************77999999**************************998888..9999986 PP
2B347.92.4e-151722441487
                      T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      + l +p +f e+h++  +e  +++l   +g+ W+v+l++  r +++r+ ++ GW +F+ +ngL +gD++ F++ ++
  ONIVA03G08950.4 172 QYLNVPMEFQEAHEYARRE--KVVL-RMRGEAWTVRLKHsrRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLRE 244
                      56889********988554..4555.5599*******9876667777*************************6654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MEDQMANLRL TDFEFFRIIL PGSSKTKLKL PYKFARELGD RELREARLRV AGEGRRPWDV  60
KVFDDDVSGD VYLGRGWQEF ARAHDLRDGH FLIFRYDGAA AFTVTVFDET MCRRDYRRHH  120
DAAGTGSSSS SDSSDAAAAA AATAAAEGVG DVALSQFAVT LRQCNLEDKQ AQYLNVPMEF  180
QEAHEYARRE KVVLRMRGEA WTVRLKHSRR ERGQRTAFRY GWHRFCVDNG LAVGDTCFFR  240
VLREGDLRRG GAADDHVLKV AVRKADGTTL E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.18e-20B3 family protein