PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G10680.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family G2-like
Protein Properties Length: 250aa    MW: 27382.7 Da    PI: 8.2372
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G10680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like43.28.6e-1482123150
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHL 50 
                      k+r++W+peLH+rFv  +++L G++         lmkv+gLt ++vkSHL
  ONIVA03G10680.1  82 KARRCWSPELHRRFVATLQRLDGPQ--------GLMKVDGLTDDEVKSHL 123
                      68*******************9998........79**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MSISNHHVSN AFMPLATSPV FAKSPEKAAT ATPLPAAVPD LSLSSPACPA APASVTSSAV  60
TDVARVQRRR QQQQQQQAVQ RKARRCWSPE LHRRFVATLQ RLDGPQGLMK VDGLTDDEVK  120
SHLHVVQSQL LLLQPKKIAI CRWQQFDTPL LEKKNSRISK QIVKKYRLHT RRASDCGGDS  180
GGLWTPPPEQ YTTSQHNMSP ALTVSSSHAV SVTAGDSCDG GEEEEEEEDD GKSESYSWEM  240
QNGARASLSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.12e-12G2-like family protein