PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G11650.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

FAR1

Protein Properties

Length: 674aa MW: 74818.2 Da PI: 6.0179

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G11650.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.8	2.8e-26	70	160	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++YA+++GF++r+s+ ++s+r+++i++r+ vCskeg++e+++ + +++++ r+ tr+gCka+l++kk +kw+vtk+ + HnH ONIVA03G11650.1 70 DFYSKYARHAGFRIRISRYTRSRRDNSIISRRIVCSKEGFHETRDCEnlhVDQKQQARVGTRVGCKAMLMIKKFGPDKWVVTKFIKIHNHG 160 6*****************************************999998899999********************************5 PP
2	FAR1	86.7	3.4e-27	207	300	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YA+ GF+ r+s+ +s+r+++i++r+ vCskeg+re + +k ++++r+r+ tr+gCka+++vk++++gkw+v+k+e+eHnH+l ONIVA03G11650.1 207 FYINYARVNGFRARISRYCRSRRDNSIISRQIVCSKEGFREVRARKditdgGKTTKRPRMITRVGCKAMIVVKRMNSGKWMVSKFEKEHNHSLL 300 9****************************************9999999999999*********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MEGVVTSSVG EPNQDNEPRD SSIELPRVIT DMETSAMHDP EAQKLIGHEA DTELTPYEGM 60 EFESEDAARD FYSKYARHAG FRIRISRYTR SRRDNSIISR RIVCSKEGFH ETRDCENLHV 120 DQKQQARVGT RVGCKAMLMI KKFGPDKWVV TKFIKIHNHG PVPPRKPHAG EHHDCDLMEN 180 PHSIEVDPID EPVEGMEFES EEAAKLFYIN YARVNGFRAR ISRYCRSRRD NSIISRQIVC 240 SKEGFREVRA RKDITDGGKT TKRPRMITRV GCKAMIVVKR MNSGKWMVSK FEKEHNHSLL 300 SSRAVPITSN DSSREVIDFA ATSNDPNEVK AEGCSTGIQC NSTDSLTVLY NHLCQEAIKF 360 AKEGSVTEEI YHVAMNALKE AAEKVSEVKR SHPTMSQSKH EVMQMETMSA SQCSNDDKQK 420 TMTPQLKFLQ EPSPSLVLIP TNLLTHSSSN CADNIPLSCD LTINETTVAI PAIPLTLYMP 480 IMKNPTGDSA ECSPDIFPFS WNADGQYRLL AAPIEAVPIS YRPAEPIQQP HGSFPNSGPL 540 PGFLPKLYKR GKGPNSLVHA TALACGARVV PPEEAASLIK AIESKIRSGG ATIAKLPSSS 600 LTPLIPEVAS MSSSSEDDEE NDHSEPLMAS VEHNCHDQSS EEMKLEADPP SELETEAENC 660 SAQPENENNG PTHC

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MEGVVTSSVG EPNQDNEPRD SSIELPRVIT DMETSAMHDP EAQKLIGHEA DTELTPYEGM  60
EFESEDAARD FYSKYARHAG FRIRISRYTR SRRDNSIISR RIVCSKEGFH ETRDCENLHV  120
DQKQQARVGT RVGCKAMLMI KKFGPDKWVV TKFIKIHNHG PVPPRKPHAG EHHDCDLMEN  180
PHSIEVDPID EPVEGMEFES EEAAKLFYIN YARVNGFRAR ISRYCRSRRD NSIISRQIVC  240
SKEGFREVRA RKDITDGGKT TKRPRMITRV GCKAMIVVKR MNSGKWMVSK FEKEHNHSLL  300
SSRAVPITSN DSSREVIDFA ATSNDPNEVK AEGCSTGIQC NSTDSLTVLY NHLCQEAIKF  360
AKEGSVTEEI YHVAMNALKE AAEKVSEVKR SHPTMSQSKH EVMQMETMSA SQCSNDDKQK  420
TMTPQLKFLQ EPSPSLVLIP TNLLTHSSSN CADNIPLSCD LTINETTVAI PAIPLTLYMP  480
IMKNPTGDSA ECSPDIFPFS WNADGQYRLL AAPIEAVPIS YRPAEPIQQP HGSFPNSGPL  540
PGFLPKLYKR GKGPNSLVHA TALACGARVV PPEEAASLIK AIESKIRSGG ATIAKLPSSS  600
LTPLIPEVAS MSSSSEDDEE NDHSEPLMAS VEHNCHDQSS EEMKLEADPP SELETEAENC  660
SAQPENENNG PTHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	8e-31	FAR1 family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G11650.1