PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G12480.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 84aa    MW: 9185.21 Da    PI: 8.5165
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G12480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.91.7e-152979256
              AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                     +++GVr ++ +g++ AeI++      ++++ +lg f+taeeA + +++a+++l+g+
  ONIVA03G12480.1 29 KFRGVRKRP-WGKYGAEIHV----SqQSAHMWLGMFDTAEEATRVYDHAALRLRGP 79
                     89*******.**********....3245**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MCRSGEEEDG SGGGRGGFGT SVDVAPERKF RGVRKRPWGK YGAEIHVSQQ SAHMWLGMFD  60
TAEEATRVYD HAALRLRGPS GMTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53290.11e-22ERF family protein