PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G14950.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family Trihelix
Protein Properties Length: 214aa    MW: 23730.1 Da    PI: 10.3133
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G14950.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.87.9e-1020102284
         trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                      W++ e+ aLi+a   ++ + +rg l +++W++ ++++      + r  +r+  qC+ + + l+ ryk++ +          s +++f++
  ONIVA03G14950.1  20 WSDGETAALIDAWGPLHVARSRGPLPAKDWRAAASAVnarraaAGRRHNRTRAQCRARVQTLKERYKRELAKPPP------SGWRHFSR 102
                      ***************************************999888889*******************98665553......24555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MSSSKPSPQQ HQQQRANEWW SDGETAALID AWGPLHVARS RGPLPAKDWR AAASAVNARR  60
AAAGRRHNRT RAQCRARVQT LKERYKRELA KPPPSGWRHF SRLQEFLLAG PPPGFPPKTM  120
PPASVKKEEE EECQDEAVGG GGGSGGLLGR WVVPTRPRNG AAAWCPVGVV VTKLAEVYER  180
VELARLEVEK EKVAMEMEKA MQEAVKLKEE KLDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.22e-07Trihelix family protein