PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G15770.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 109aa    MW: 12610.3 Da    PI: 10.1863
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G15770.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.41.4e-123378348
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48
                     +WT+eEd  l ++  + G+++W+++a+ m+  +R++ qc++rw+++l
  ONIVA03G15770.1 33 AWTPEEDAVL-RLAMENGSRHWRRVAAQMPrRRRSPAQCRDRWRDHL 78
                     7*****9877.5667899999***********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MDMELSSSST TVASSPASPL LGRCVVRIRL PPAWTPEEDA VLRLAMENGS RHWRRVAAQM  60
PRRRRSPAQC RDRWRDHLAR DVFHRHFTSA DDTELARLCL HLDDAGHRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.13e-07MYB family protein