PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G16920.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 392aa MW: 42172.6 Da PI: 8.814

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G16920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.9	4.7e-54	9	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeel+v+yL+++++++++++ ++i++vdiyk++PwdLp+k++ +++ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+++s ONIVA03G16920.1 9 LPPGFRFHPTDEELIVHYLRNRAASSPCPV-SIIADVDIYKFDPWDLPSKANYGDREWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHS 101 79**************************.89***********999999************************************ PP NAM 95 k....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++e vg+kk Lvfykgr pkg+kt+W+mheyrl ONIVA03G16920.1 102 SggaaTNESVGVKKALVFYKGRPPKGTKTNWIMHEYRL 139 977776777*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MVLSNPAMLP PGFRFHPTDE ELIVHYLRNR AASSPCPVSI IADVDIYKFD PWDLPSKANY 60 GDREWYFFSP RDRKYPNGIR PNRAAGSGYW KATGTDKPIH SSGGAATNES VGVKKALVFY 120 KGRPPKGTKT NWIMHEYRLA AADAHAANTY RPMKFRNTSM RLDDWVLCRI YKKSSHASPL 180 AVPPLSDHEQ DEPCALEENA PLYAPSSSSA ASMILQGAAA GAFPSLHAAA AATQRTAMQK 240 IPSISDLLNE YSLSQLFDDG GAAAAAPLQE MARQPDHHHH HQQQHALFGH PVMNHFIANN 300 SMVQLAHLDP SSSAAPSTSA GAVVEPPAVT GKRKRSSDGG EPTIQALPPA AAAAKKPNGS 360 CVGATFQIGS ALQGSSLGLS HQMLLHSNMG MN

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MVLSNPAMLP PGFRFHPTDE ELIVHYLRNR AASSPCPVSI IADVDIYKFD PWDLPSKANY  60
GDREWYFFSP RDRKYPNGIR PNRAAGSGYW KATGTDKPIH SSGGAATNES VGVKKALVFY  120
KGRPPKGTKT NWIMHEYRLA AADAHAANTY RPMKFRNTSM RLDDWVLCRI YKKSSHASPL  180
AVPPLSDHEQ DEPCALEENA PLYAPSSSSA ASMILQGAAA GAFPSLHAAA AATQRTAMQK  240
IPSISDLLNE YSLSQLFDDG GAAAAAPLQE MARQPDHHHH HQQQHALFGH PVMNHFIANN  300
SMVQLAHLDP SSSAAPSTSA GAVVEPPAVT GKRKRSSDGG EPTIQALPPA AAAAKKPNGS  360
CVGATFQIGS ALQGSSLGLS HQMLLHSNMG MN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	4e-86	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G16920.1