PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G19590.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 198aa    MW: 22582.6 Da    PI: 10.1141
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G19590.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.18.5e-1358110348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48 
                      +WT+eEd  l+++ ++ G ++W+++a+ m         +R++ qc++rw+++l
  ONIVA03G19590.1  58 AWTPEEDACLARLAAENGFRHWRRVAESMAaarsgrrPRRSPGQCRDRWRDHL 110
                      7*************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEKKIDVIAM ELQGLEQEAA VQPPASAAFP SSAEEAAAAA SPTSGGKRIV LRIRLPPAWT  60
PEEDACLARL AAENGFRHWR RVAESMAAAR SGRRPRRSPG QCRDRWRDHL ARDCRDRWRD  120
HLARDVYHRP FTADDDAELA RLLLKRDGDG ERSWKDISRA AYCRTSRGMR RRWGELRDSD  180
AFLRKLWCPP PPPMQPSC