PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G20270.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 91aa    MW: 9964.33 Da    PI: 8.5297
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G20270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH192.6e-0620581654
                     HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     i +  ++L+ llP+a   ++ ++  a +L++++ YI+sL
  ONIVA03G20270.1 20 IGDLVSKLQALLPEARLRSNDRVPSARVLQETCSYIRSL 58
                     5667799*******8899*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MSSRSRSRAS SAARITDEQI GDLVSKLQAL LPEARLRSND RVPSARVLQE TCSYIRSLHR  60
EVDDLSERLA ELLAAADVST AQAAVIRGLL M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.15e-18bHLH family protein