PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G20850.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HSF

Protein Properties

Length: 394aa MW: 42009.1 Da PI: 8.6417

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G20850.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112	4e-35	25	118	2	103
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sw ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+kv e+ weF+++ F+kg+k+ll ONIVA03G20850.1 25 FLTKTYQLVDDPATDHIVSWGdDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPER---------WEFANEFFRKGEKQLL 109 9******************6667*************************************999.........************ PP XXXXXXXXX CS HSF_DNA-bind 95 ekikrkkse 103 ++i+r+k++ ONIVA03G20850.1 110 TEIHRRKTS 118 ****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MERCGSWSDC EAAAAAAQKA VPAPFLTKTY QLVDDPATDH IVSWGDDRVS TFVVWRPPEF 60 ARDILPNYFK HNNFSSFVRQ LNTYGFRKVV PERWEFANEF FRKGEKQLLT EIHRRKTSSA 120 STASPSPPPF FAPPHFPLFH HPGVAAAQHH HAFVGDDGVV AAHGIGMPFP QPHWREPNLP 180 VATRLLALGG PAPSPSSAEA GGAGRAATAA VLMEENERLR RSNTALLQEL AHMRKLYNDI 240 IYFVQNHVRP VAPSPAAAAF LQGLGMQARK KPAAANVLNN SGGSTTSSSS LTIAEEPSPP 300 PQQQHLAGEK SGGEAGSSSA ARSSAPTKLF GVHLSAAPCG AGSKRASSPE EHPPTSPATK 360 PRLVLECDDL SLTVAPSSSS QQQLSAASSP TSTS

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MERCGSWSDC EAAAAAAQKA VPAPFLTKTY QLVDDPATDH IVSWGDDRVS TFVVWRPPEF  60
ARDILPNYFK HNNFSSFVRQ LNTYGFRKVV PERWEFANEF FRKGEKQLLT EIHRRKTSSA  120
STASPSPPPF FAPPHFPLFH HPGVAAAQHH HAFVGDDGVV AAHGIGMPFP QPHWREPNLP  180
VATRLLALGG PAPSPSSAEA GGAGRAATAA VLMEENERLR RSNTALLQEL AHMRKLYNDI  240
IYFVQNHVRP VAPSPAAAAF LQGLGMQARK KPAAANVLNN SGGSTTSSSS LTIAEEPSPP  300
PQQQHLAGEK SGGEAGSSSA ARSSAPTKLF GVHLSAAPCG AGSKRASSPE EHPPTSPATK  360
PRLVLECDDL SLTVAPSSSS QQQLSAASSP TSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	5e-74	HSF family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G20850.1