PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G21780.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 373aa    MW: 41151.4 Da    PI: 5.2844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G21780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.70.000233223611054
                      HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +rRR+ri +  + Lr+++P      +k  +  ++L +A+ Y+k+L
  ONIVA03G21780.1 322 KRRRERIQETVAALRKIVPGG---IAK--DATAVLDEAICYLKYL 361
                      9******************97...333..3458999999999999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MRWLALSVDI FRKGISLNLY CRSLKFGIED LVAGIAVWVS VVAWQFFQGE RAGVLMVWQP  60
VAQTRFRVFK HENGIAVRVI ACFQPSQDCQ AEYFRHLLKP KILFAGCFLM GEKVNPWCHW  120
SNPPWTESSA NNLHPPDVSL DNTNSVALPT YLNSDGYIYS GVAASMPSIA ASGTLDTVPE  180
LQGSNETNVT DVGAQNTECM HENTEEIDAL LCSDSDEGCL KVQELNNRVR KYPMQNDTMS  240
VESVASAGAS QPAKKRRLSS GTDRSVVDTA SSARPDHSVD QKHLSHDDDA QSCCIGEVES  300
DHQFALREGE EAEGDDGPDD RKRRRERIQE TVAALRKIVP GGIAKDATAV LDEAICYLKY  360
LKLKVKTLGA VSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1321325RKRRR