PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G22450.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GRAS

Protein Properties

Length: 214aa MW: 23940.6 Da PI: 10.0342

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G22450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	71.9	1.2e-22	1	98	239	345
GRAS 239 vvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332 +vv+eqe + + erf+e l+yy+alfd+le++ +r s er+ vEr llg+ei+n+v c g e rerhe rle aGF+ vpls++ ONIVA03G22450.1 1 MVVTEQEPHA--AGLTERFVEVLNYYAALFDCLEVGGARGSVERTRVERWLLGEEIKNIVVCDGGELRERHE-------RLEGAGFGRVPLSYY 85 6777887655..899******************************************************9.......999******** PP GRAS 333 aakqaklllrkvk 345 a qa+++ + ONIVA03G22450.1 86 ALLQARRVAQGLR 98 ****9988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MVVTEQEPHA AGLTERFVEV LNYYAALFDC LEVGGARGSV ERTRVERWLL GEEIKNIVVC 60 DGGELRERHE RLEGAGFGRV PLSYYALLQA RRVAQGLRLR RLQGPGGEGQ LLPLLARSRP 120 LLRLRMARPP LRRLAPLAAI DASPLLPRHC YLALLPAASP PYSSRRRLAL LSIRTAQSRE 180 REDEGREEGK ERVGLFGQAD RCCLRRSHAD SAVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G50420.1	5e-16	GRAS family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G22450.1