PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G22460.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 88aa    MW: 9347.56 Da    PI: 4.5722
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G22460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS47.14e-15356165219
             GRAS 165 LakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvs 219
                      L+k Ae+l+vpf+fn+ v++rl++l++e+Lrvk+gEala++++lqlh ll+++ +
  ONIVA03G22460.1   3 LTKEAERLDVPFQFNP-VVSRLDALDVESLRVKTGEALAICFSLQLHCLLASDDD 56 
                      99**************.7*******************************976654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MALTKEAERL DVPFQFNPVV SRLDALDVES LRVKTGEALA ICFSLQLHCL LASDDDATAG  60
AGGDKERRSP ESGLSPSKSR ADAFLGAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.13e-19GRAS family protein