PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G27200.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 328aa    MW: 34571.9 Da    PI: 7.1341
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G27200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.53.4e-1231273126
              NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.........kvkaeek....ewyfFskrdkkyatgkrknratksgyW 83 
                       G+ F+P d+el++++L++k+++++++l  +i+++d+y++ P dL +         + +         +yfF++ ++    g  ++r       
  ONIVA03G27200.1   3 GGLTFSPPDHELITKFLRPKIADDTIKL-PFIHDADVYSAAPPDLAArhvpargtdRGD---GagavYYYFFCPVHRGGG-GVGARRR------ 85 
                      699************************9.88**************84466665443111...123235588888877544.3333332...... PP

              NAM  84 katgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmhey 126
                          +  +vl+++g+ vg  + L +    +g+ ++ ++  W+m e+
  ONIVA03G27200.1  86 ----QRAAVLDAGGRRVGHLRRLSYGvreRGSGRRLTRLGWCMTEF 127
                      ....345666667777777777777655456666666777777777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MAGGLTFSPP DHELITKFLR PKIADDTIKL PFIHDADVYS AAPPDLAARH VPARGTDRGD  60
GAGAVYYYFF CPVHRGGGGV GARRRQRAAV LDAGGRRVGH LRRLSYGVRE RGSGRRLTRL  120
GWCMTEFGVD HGGGGGGEAD AGGLVLCKMY RSPRAAQVEA RLQAAAASTS GSKRKQAADD  180
LIHAPASSRH RHADVMPAGV DGDEVGSIHP SVQFPPPPEE QTLVQTRDGP RTDHEVIMAL  240
AMGATVDELL GPKHGEPGES SPFPAPAAEP CSISGGGDIF WTASGVVPCP DMAMAFPAPP  300
AGEFSWDKEL AWIRELLSGS RPSSCSAV