PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G27260.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 1601aa    MW: 181457 Da    PI: 10.0042
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G27260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.43.4e-15361171198
                      HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
               B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       +++ +++p kf++++gg+   s t++l++++g  + v++  +k+++++vl+ GW+ Fv+a++++e+D+++F+++++s+f   v +f+
  ONIVA03G27260.1  36 DSRRSMIMPCKFVNHFGGD--FSGTIKLQSPNGILYAVEV--TKCKNKTVLRCGWEAFVDAHHIEENDSLLFRRVENSRF--EVLIFD 117
                      45566999*****888999..7779***************..*******************************8888888..888887 PP
2B339.51e-122273081898
                      --HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..EEEEE- CS
               B3  18 lpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelvvkvfr 98 
                      ++  +ae h   +++s+t+tl+   ++++W  ++  rk  ++ +l++ W eFvk+n+++e D++vF  +++  ++f+++v+++r
  ONIVA03G27260.1 227 ISFCYAEVHF--PHKSVTVTLQRpCKSKKWHPRFYKRKDARMNILRGSWVEFVKDNRVQEQDICVFVPTKDarRNFTFTVHLLR 308
                      3333344443..56899******5677*******77888889*************************66442577878887776 PP
3B345.41.4e-144194961090
                      HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
               B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                      + ++++l l  +fa++  ++ ++  + ++ +++g++W   +++r + +r ++ +GW +Fv++n+L++gD+++F+++ +++ 
  ONIVA03G27260.1 419 SASRCQLELGARFAAAVHLPDRR--QTVVLQRRGERWATVMQIRSGTRRLLI-SGWHRFVRDNRLRVGDICLFEFKTHERW 496
                      345599********999888655..3666778*********88888877655.5********************8755444 PP
4B344.33.2e-147498281297
                      HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
               B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                      + + +++p +f++++ggk   + t++le+++g  + v++  + + ++++l+ GW+ Fv+a+++keg++++F+++++s+    v ++
  ONIVA03G27260.1 749 SMHSMIMPDRFVSHFGGK--IPGTIKLESPNGILYVVEV--TECMNKTLLQCGWEAFVDAHNIKEGESLLFRHIENSRY--EVLIL 828
                      456799******888888..5669***************..*******************************9986655..66665 PP
5B339.51e-1295810401698
                       EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS
               B3   16 lvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98  
                       lv++ ++a+ h   ++e+ t+tl+ +s  ++W  ++  r  ++ ++l++ W++Fv++n L+e D+++F  ++  ++f ++v++++
  ONIVA03G27260.1  958 LVISSRYASVHF--PRETATITLQRPSKrKKWYPRFYKRIDKSDHMLRGQWQNFVHDNCLQEEDICLFVPTKGgRNFAFTVHLLQ 1040
                       799999999997..456779*****66659******66777777*************************8766589988888876 PP
6B347.33.6e-15115612391698
                       EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
               B3   16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98  
                       l l+ ++a+++   +k +++tl+l + +g  W+++l +     k++r +lt+GW++F+++n+L++gDf++F+l+++++ ++ v++++
  ONIVA03G27260.1 1156 LELSSRYAASYlP-DK-NHQTLVL-QCKGMIWQINLVVrrrYTKGKRWFLTAGWRKFAHDNRLRVGDFCLFELKKKKKLTMEVHIIS 1239
                       6788899999952.33.3346665.569*******97754433334478************************999*******9986 PP
7B353.44.8e-17127913601097
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
               B3   10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97  
                       + + + +++p +f++++ggk   + t++le+++g  + v++  + + +++vl+ GW+ Fv+a+++k+gD+++F+++++s+f   v+++
  ONIVA03G27260.1 1279 TDSMHSMIIPDRFVNHFGGK--IPGTIKLESPNGILYVVEV--TECMNKTVLQCGWEAFVDAHHIKVGDSLLFRHIENSCF--EVMIL 1360
                       4455679*******888888..5669***************..**************************************..66665 PP
8B341.62.2e-13151215951496
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
               B3   14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96  
                       ++l l  ++a++  ++ ++  + ++ ++ g++W+  +  + ksgr     +l +GW++Fv++n+L++gD+++++l+++ s+ +++v+ 
  ONIVA03G27260.1 1512 CQLELGARYAAAVHLPDRR--QAVVLQRMGQRWDTVM--QTKSGRcttrRFLINGWSRFVRDNRLCVGDICLLELKKHeSKLTMTVHT 1595
                       6677777788777777555..5889999*********..555555224445557*********************9877888888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1601 aa     Download sequence    
MAGSGSCMKK SCVCCQKYLE HLDGKMNCFV RRMTADSRRS MIMPCKFVNH FGGDFSGTIK  60
LQSPNGILYA VEVTKCKNKT VLRCGWEAFV DAHHIEENDS LLFRRVENSR FEVLIFDSDD  120
CEKNHQRVKD LPEIKREASA IVEKQQTWHL LLRIQAREDS PSEHESVESG DLETSQEPYV  180
LSRRSYLSEF QKEKVDALIQ EIQPETTAFV AIMRKSNVQL PTPFLVISFC YAEVHFPHKS  240
VTVTLQRPCK SKKWHPRFYK RKDARMNILR GSWVEFVKDN RVQEQDICVF VPTKDARRNF  300
TFTVHLLRVA AAYSRGGTGV DRAGSSLGRT DVKSASEISI KEEPIDQEEN VSSRNRYGVS  360
DESEEDEDSE GPAHPPYIVP CKSRLSRLQK KIVEEKVRSI QSKFPVYVAI MKKSNVERSA  420
SRCQLELGAR FAAAVHLPDR RQTVVLQRRG ERWATVMQIR SGTRRLLISG WHRFVRDNRL  480
RVGDICLFEF KTHERWRLTM AVHAIFREHS RVALPRGGSG GDDPAAPLPH PYPLLRSASP  540
SPERPPAKPR GHKDGSGGVL LVSSRSGGLG SRPEWRRRCL PDPRRSGRIW RDGLAARTGD  600
GGGRGELRGV VLWVMAAGMA TVLGWRWWRP RIRRWRTRIR RRRTRIRRRR GGQRWPEHAS  660
TPRLPLASSG APLDIGRRWW RGRRPDLAPC PDPARPRVGT GWLESGRRAG GVNIAGNTHR  720
KKSCACCKEY LEHLGGKMRC FLRRMAADSM HSMIMPDRFV SHFGGKIPGT IKLESPNGIL  780
YVVEVTECMN KTLLQCGWEA FVDAHNIKEG ESLLFRHIEN SRYEVLILDS DDCEKVFSCA  840
GIRNGSCVQD KTVDPVDSSG SSSNDTTQSS RSRNTENLTA MCSSSEKSGE DSPSGYEFHE  900
SVEPQTPSGS DYVLSRRTYL SEAQKERVVA HIQDIQPEIT VFVAVMKKCN LQSPAPYLVI  960
SSRYASVHFP RETATITLQR PSKRKKWYPR FYKRIDKSDH MLRGQWQNFV HDNCLQEEDI  1020
CLFVPTKGGR NFAFTVHLLQ AEATHSRDGT DVHKIGSSQN KRNSKMASQV HIKEAPGGDV  1080
SSESNKHGVS HESLESEDSD GPSEPPYISS MRRRLSQLQK KTVEEKVRAI QSEIPICVAT  1140
ISKLAGSGGK GKFRGLELSS RYAASYLPDK NHQTLVLQCK GMIWQINLVV RRRYTKGKRW  1200
FLTAGWRKFA HDNRLRVGDF CLFELKKKKK LTMEVHIISN LQLHMAGGGS RMKKSCACCK  1260
RYLEHLGGKM SCFLIRMTTD SMHSMIIPDR FVNHFGGKIP GTIKLESPNG ILYVVEVTEC  1320
MNKTVLQCGW EAFVDAHHIK VGDSLLFRHI ENSCFEVMIL DSDGCERVFS CAGIKTSSCV  1380
HDKTVDPVDT SGRSSDDTAQ PSRSERFVRC QRDTSNDRRN TASLTVVSSS SEESENVSLK  1440
SNRNGVSDES QESEDSEGPA GPPYILSWKS KRRLSSLQKK IIKEKVRSIQ SEVPIYVAIM  1500
NKSNIGLISS PCQLELGARY AAAVHLPDRR QAVVLQRMGQ RWDTVMQTKS GRCTTRRFLI  1560
NGWSRFVRDN RLCVGDICLL ELKKHESKLT MTVHTIFSQQ S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1638645RIRRRRTR
212251231LKKKKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-18B3 family protein