PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G27270.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 1134aa    MW: 128488 Da    PI: 9.0155
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G27270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.24.7e-16107188997
                      HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
               B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       ++  + +++p+kf++++gg    s+t+ l +++g ++ vk+  + + ++++l+ GW+ Fv+a++++e+D+++F+++++s+f   v ++
  ONIVA03G27270.1 107 ANF-GHSMTIPNKFLDHFGGT--LSRTIELVSPKGIVYIVKV--TEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRF--EVLIL 188
                      334.456********888877..899****************..*********************************99999..66655 PP
2B361.51.4e-19320419198
                      EEEE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE CS
               B3   1 ffkvltpsdvlks.grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sef 90 
                      f+ ++++s+v+++ ++lv+pk++a++h   + es+t+tl+   ++++W   + +rk +++y+l ++Wk+Fv++n++kegD+++F+l+  +  ef
  ONIVA03G27270.1 320 FVAIMKHSNVNSRrACLVIPKRYASAHF--PLESQTITLQRqGKNKKWYPMFYIRKDGSGYMLYGCWKKFVRDNHVKEGDMCIFHLTkFTgGEF 411
                      6677888888887788***********6..446779999985666****99977999999*************************874445666 PP

                      ..EEEEE- CS
               B3  91 elvvkvfr 98 
                        +v+++r
  ONIVA03G27270.1 412 GATVHLLR 419
                      66777666 PP
3B347.14.2e-15495573887
                      -HHHHT..T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3   8 sdvlks..grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87 
                      s+v++    ++++ ++fa+++   +e+++tltl  +    W+vk+  r +sg   ++t+GW++Fv++n+L+  D+++F+l+++
  ONIVA03G27270.1 495 SNVGTDglYIIIFGRQFATRYL--PEGEQTLTLLMTGKSAWQVKM--RPRSGDaKMITTGWRHFVHDNHLQIEDICLFQLMND 573
                      4555551123466899**9994..345679***************..77777779************************9865 PP
4B357.42.7e-18609693598
                      -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
               B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      +  s +++++ +++p+kf++++ggk   s+t+ le+++g+++ vk+  +k+ ++ vl+ GW+ Fv+a++++e+D+++F+++++s+f   v +++
  ONIVA03G27270.1 609 M--SANFEHS-MIIPNKFLNQFGGK--ISRTVELESPKGNVYVVKV--SKHMNKAVLQCGWEAFVDAHQIEENDSLLFRHIENSRF--AVLILD 693
                      4..5556655.***********999..888****************..*********************************99999..777776 PP
5B343.84.5e-14821919399
                      EE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS
               B3   3 kvltpsdvlks.grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 
                      +++++s+v+++ + lv+ k++a ++   +++s+t+tl+   ++r+W  k+ +rk + +y+l + W +Fv  n++kegD+++F+l+  + ++f+ 
  ONIVA03G27270.1 821 TTMKHSNVNSHhASLVIAKHYACAYF--PHTSQTITLKWhGKNRKWHPKFYIRKDQVGYILHGRWIDFVCHNHVKEGDICIFHLKnFNgRKFRA 912
                      678888888886789*******8996..456779999985788*******77888888*************************98666688888 PP

                      EEEEE-S CS
               B3  93 vvkvfrk 99 
                      +v+++r+
  ONIVA03G27270.1 913 TVHLLRE 919
                      8888875 PP
6B351.91.4e-1610371129898
                       -HHHHT..T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..E CS
               B3    8 sdvlks..grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr..sefelv 93  
                       s+v++    +++l ++fa+++  ++ e+ tltl +  +g+ W+vk+  r +sg   ++t GW++Fv++n L++ D+++F+l+++  ++  ++
  ONIVA03G27270.1 1037 SNVGTDglYIITLGRQFATRYL-PEGEQ-TLTLLTtGTGKAWQVKM--RPRSGDaRMFTLGWRDFVRDNLLQTEDICLFQLMKNseRGLAMK 1124
                       55555522345899*****993.33344.5555554999*******..777776689***********************997734455566 PP

                       EEEE- CS
               B3   94 vkvfr 98  
                       v+++r
  ONIVA03G27270.1 1125 VHIIR 1129
                       66666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1134 aa     Download sequence    
MAQGPTYSPV FPFLLTSFFF PSYCHSPGRR WRRSGRQRAG EAVGGGRSYL AAQEGAETGL  60
NELARPRGRF TCMAGQGSQK KKSCDWSKRY VDHLNGKMKC FHLQMSANFG HSMTIPNKFL  120
DHFGGTLSRT IELVSPKGIV YIVKVTEHMN KTILQCGWEA FVDAHHIEEN DSLLFRHIEN  180
SRFEVLILDS DGCEKVFTCA GIKKTSSVQE RNAAPVDISR STHDETTQSS GSKKIVRCQR  240
ASDSQRGKTA KLAETSSSGE SGEEGTDSST SEDESSYELD DPQMPPGRNY VLSRWTSLSE  300
AQEEKVDMLV QDIQPEIPVF VAIMKHSNVN SRRACLVIPK RYASAHFPLE SQTITLQRQG  360
KNKKWYPMFY IRKDGSGYML YGCWKKFVRD NHVKEGDMCI FHLTKFTGGE FGATVHLLRE  420
TKSGSLGSFH TSHKRFDLRD GRTWPKVTGV RRVSSRPYLT ADRVSLTEEQ VRKVEEVVHS  480
IQSEGPMYVS IMNKSNVGTD GLYIIIFGRQ FATRYLPEGE QTLTLLMTGK SAWQVKMRPR  540
SGDAKMITTG WRHFVHDNHL QIEDICLFQL MNDEIHMAGQ GSQMKKYCDC CKRYVDHSNG  600
KMKCFHRQMS ANFEHSMIIP NKFLNQFGGK ISRTVELESP KGNVYVVKVS KHMNKAVLQC  660
GWEAFVDAHQ IEENDSLLFR HIENSRFAVL ILDSDGCEKV FSCSGKRRAS GVQQRNADPI  720
DVSSSTHDDT AQSSGGERFA RSESGSETAK LAATCSSGGS GEEAKESSSS EHESSYDLVD  780
PQIAPMPGYV LSRGTNLSQA HEEKLDMLVQ EIRPEIPLYV TTMKHSNVNS HHASLVIAKH  840
YACAYFPHTS QTITLKWHGK NRKWHPKFYI RKDQVGYILH GRWIDFVCHN HVKEGDICIF  900
HLKNFNGRKF RATVHLLRET IPHSFGALHI PKRFESRNGR MRLKMTDDRR VSSTECRRGT  960
MEPSTTNVKK EADNEQCNNG QGKRQEPLNF DVSVGSSKPY LTADRVSLTE EQFMKVEENV  1020
HSIQSEGPIY VSIMNKSNVG TDGLYIITLG RQFATRYLPE GEQTLTLLTT GTGKAWQVKM  1080
RPRSGDARMF TLGWRDFVRD NLLQTEDICL FQLMKNSERG LAMKVHIIRH NERS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-18B3 family protein