PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G27270.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 562aa    MW: 63676.3 Da    PI: 9.453
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G27270.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.51.8e-16107188997
                      HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
               B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       ++  + +++p+kf++++gg    s+t+ l +++g ++ vk+  + + ++++l+ GW+ Fv+a++++e+D+++F+++++s+f   v ++
  ONIVA03G27270.2 107 ANF-GHSMTIPNKFLDHFGGT--LSRTIELVSPKGIVYIVKV--TEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRF--EVLIL 188
                      334.456********888877..899****************..*********************************99999..66665 PP
2B362.95.3e-20320419198
                      EEEE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE CS
               B3   1 ffkvltpsdvlks.grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sef 90 
                      f+ ++++s+v+++ ++lv+pk++a++h   + es+t+tl+   ++++W   + +rk +++y+l ++Wk+Fv++n++kegD+++F+l+  +  ef
  ONIVA03G27270.2 320 FVAIMKHSNVNSRrACLVIPKRYASAHF--PLESQTITLQRqGKNKKWYPMFYIRKDGSGYMLYGCWKKFVRDNHVKEGDMCIFHLTkFTgGEF 411
                      6677888888887788***********6..446779999985666****99977999999*************************874445666 PP

                      ..EEEEE- CS
               B3  91 elvvkvfr 98 
                        +v+++r
  ONIVA03G27270.2 412 GATVHLLR 419
                      66777666 PP
3B333.47.8e-114595571198
                      HHTT-EE--HHH.HTT.....---..--SEEEEEETTS.....-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE. CS
               B3  11 lksgrlvlpkkfaeeh.....ggkkeesktltledesg.....rsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr..sefe 91 
                      l+ +r++l  + +++      ++++e+++ ++++++s+         vk+  r +sg   ++t GW++Fv++n L++ D+++F+l+++  ++  
  ONIVA03G27270.2 459 LTADRVSLTEEQVRKVeevvhSIQSEGPMYVSIMNKSNvgtdgLYIIVKM--RPRSGDaRMFTLGWRDFVRDNLLQTEDICLFQLMKNseRGLA 550
                      55567777777777777777777777888888888887555444445555..666655689***********************9977344555 PP

                      .EEEEE- CS
               B3  92 lvvkvfr 98 
                      ++v+++r
  ONIVA03G27270.2 551 MKVHIIR 557
                      6666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    
MAQGPTYSPV FPFLLTSFFF PSYCHSPGRR WRRSGRQRAG EAVGGGRSYL AAQEGAETGL  60
NELARPRGRF TCMAGQGSQK KKSCDWSKRY VDHLNGKMKC FHLQMSANFG HSMTIPNKFL  120
DHFGGTLSRT IELVSPKGIV YIVKVTEHMN KTILQCGWEA FVDAHHIEEN DSLLFRHIEN  180
SRFEVLILDS DGCEKVFTCA GIKKTSSVQE RNAAPVDISR STHDETTQSS GSKKIVRCQR  240
ASDSQRGKTA KLAETSSSGE SGEEGTDSST SEDESSYELD DPQMPPGRNY VLSRWTSLSE  300
AQEEKVDMLV QDIQPEIPVF VAIMKHSNVN SRRACLVIPK RYASAHFPLE SQTITLQRQG  360
KNKKWYPMFY IRKDGSGYML YGCWKKFVRD NHVKEGDMCI FHLTKFTGGE FGATVHLLRE  420
TKSGSLGSFH TSHKRFDLRD GRTWPKVTGV RRVSSRPYLT ADRVSLTEEQ VRKVEEVVHS  480
IQSEGPMYVS IMNKSNVGTD GLYIIVKMRP RSGDARMFTL GWRDFVRDNL LQTEDICLFQ  540
LMKNSERGLA MKVHIIRHNE RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-12B3 family protein