PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G27320.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 919aa    MW: 106005 Da    PI: 9.7465
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G27320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.15.1e-2124113199
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      ffkv+     +++ ++++p kfae++  +   + t++l+ ++g++ +v +  +k+s++ vltkGW eF++++++k gDf+vF+++g+s+f   v
  ONIVA03G27320.1  24 FFKVM--IGGFRR-QMTIPYKFAENFRDQ--IQGTIKLKARNGNTCSVLV--DKCSNKLVLTKGWAEFANSHDIKMGDFLVFRYTGNSQF--EV 108
                      56666..445555.6********888655..4459***************..**************************************..99 PP

                      EEE-S CS
               B3  95 kvfrk 99 
                      k+f+ 
  ONIVA03G27320.1 109 KIFDP 113
                      99986 PP
2B354.22.5e-17212295187
                      EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3   1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      f+ v+++s+v+++ + + +++k+a+e+  gg+    ++lt  +++g++W+vk++++k++ r +l+kGW++F ++n+L++gD+++F+l ++
  ONIVA03G27320.1 212 FVAVMKKSNVTRQpCYVAISRKYANEYfpGGD----QMLT-LQRHGKRWQVKFCISKRKLR-MLSKGWRKFTRDNELQVGDTCLFELLKN 295
                      77889999999999999**********76555....3455.667*********77666666.89**********************8765 PP
3B365.58.1e-213284091299
                      HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++r+++p kfa++++g+   skt++le ++g +++v++  +kk +  vl++GW++Fv+a++L+ gDf+vFk++g  +f l v +f+ 
  ONIVA03G27320.1 328 FHKRMTIPDKFARHFKGV--ISKTIKLEPRNGYTFDVQV--TKKLNILVLGSGWESFVNAHDLNMGDFLVFKYNG--DFLLQVLIFDP 409
                      4568********999999..899****************..*******************************976..88889999985 PP
4B340.54.7e-135415913486
                      SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
               B3  34 ktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                      ++l+l++ + +sW+v++ ++++ks++  lt+GWk+Fv++n L+ gD ++F+  +
  ONIVA03G27320.1 541 QELMLRH-RDKSWKVRFyRFNNKSRK--LTQGWKRFVHDNYLRMGDLCLFEILK 591
                      5677666.78******9455777777..9**********************655 PP
5B357.42.6e-18625711297
                      EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
               B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                      fkv+     ++  r+++p++f++ + gk   ++t++l+ ++g +++v++  +k+ g++ l++GWk Fv a++L+ gDf+vF++dg s+   +v 
  ONIVA03G27320.1 625 FKVM--IGRFR-ERMIIPNEFLQYFRGK--IPRTIKLQLRDGCTYDVQV--TKNLGKISLQSGWKAFVTAHDLQMGDFLVFSYDGISKL--KVL 709
                      5555..44444.57********555666..66789999999********..********************************986555..777 PP

                      EE CS
               B3  96 vf 97 
                      +f
  ONIVA03G27320.1 710 IF 711
                      77 PP
6B347.53.1e-158359181299
                      HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      ks+ + + +++a+ +    ke +  +t  +++g+ Wev ++ +k  ++  l++GW++F+++n+L++gD+++F+l +++e +++v+++ k
  ONIVA03G27320.1 835 KSQTVDICREYADVYlP-FKELN--MT-LQRHGKNWEVLCR-TKDTRTKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIPK 918
                      56667777888877742.22333..44.348*********4.44444478***********************9999999999999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 919 aa     Download sequence    
MSKSGCERCR GRGFWDTDDQ DTYFFKVMIG GFRRQMTIPY KFAENFRDQI QGTIKLKARN  60
GNTCSVLVDK CSNKLVLTKG WAEFANSHDI KMGDFLVFRY TGNSQFEVKI FDPSGCVKAA  120
SHNAVNIGQH AQNMQGDPIE ILSCSDEHLR AQSLTTERQN QPEKDVIDNC NKKMKTEHAS  180
SSEDDQETPT AEVHRMKVEE MVRAIHSNHP VFVAVMKKSN VTRQPCYVAI SRKYANEYFP  240
GGDQMLTLQR HGKRWQVKFC ISKRKLRMLS KGWRKFTRDN ELQVGDTCLF ELLKNENPCG  300
QKMRKLNTRS TARDDQEKYF FKVMIGDFHK RMTIPDKFAR HFKGVISKTI KLEPRNGYTF  360
DVQVTKKLNI LVLGSGWESF VNAHDLNMGD FLVFKYNGDF LLQVLIFDPS GCEKSTSCSM  420
ENAIDHVGQG WKEHNDISTS YHDQPKGNKH WMQKDSSSKG NKIGNTRSSN TPSNFSGCIL  480
PRGTCLPVVQ EKKMKEKIQA IHSKTPMYGN VMTKCNVSGS PCVLEITQLY DDAYLPFNNG  540
QELMLRHRDK SWKVRFYRFN NKSRKLTQGW KRFVHDNYLR MGDLCLFEIL KNKYTMNMRR  600
PGARCREGHA HFNGNHIDGQ YKNFFKVMIG RFRERMIIPN EFLQYFRGKI PRTIKLQLRD  660
GCTYDVQVTK NLGKISLQSG WKAFVTAHDL QMGDFLVFSY DGISKLKVLI FGPSGCEKVH  720
SRPTLKNATH CGEKWEEPLH ISSNSHDLPV KSPQNVSKSE KQWDSSEQEN DTANIEEVAL  780
QGDDLQGHPV LNCILPKHTR LTDMQKQQLE SKVGAIHSEI PIYGCILRKS RVHGKSQTVD  840
ICREYADVYL PFKELNMTLQ RHGKNWEVLC RTKDTRTKRL STGWSRFAQE NNLQVGDICL  900
FELLKKKEYS MNVHIIPKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-26B3 family protein