PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G27320.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 901aa    MW: 104043 Da    PI: 9.8707
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G27320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.15e-2124113199
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      ffkv+     +++ ++++p kfae++  +   + t++l+ ++g++ +v +  +k+s++ vltkGW eF++++++k gDf+vF+++g+s+f   v
  ONIVA03G27320.2  24 FFKVM--IGGFRR-QMTIPYKFAENFRDQ--IQGTIKLKARNGNTCSVLV--DKCSNKLVLTKGWAEFANSHDIKMGDFLVFRYTGNSQF--EV 108
                      56666..445555.6********888655..4459***************..**************************************..99 PP

                      EEE-S CS
               B3  95 kvfrk 99 
                      k+f+ 
  ONIVA03G27320.2 109 KIFDP 113
                      99986 PP
2B335.22.1e-11212284176
                      EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--T CS
               B3   1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLke 76 
                      f+ v+++s+v+++ + + +++k+a+e+  gg+    ++lt  +++g++W+vk++++k++ r +l+kGW++F ++n+L+ 
  ONIVA03G27320.2 212 FVAVMKKSNVTRQpCYVAISRKYANEYfpGGD----QMLT-LQRHGKRWQVKFCISKRKLR-MLSKGWRKFTRDNELQK 284
                      77889999999999999**********76555....3455.667*********77666666.89*************86 PP
3B365.57.8e-213103911299
                      HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++r+++p kfa++++g+   skt++le ++g +++v++  +kk +  vl++GW++Fv+a++L+ gDf+vFk++g  +f l v +f+ 
  ONIVA03G27320.2 310 FHKRMTIPDKFARHFKGV--ISKTIKLEPRNGYTFDVQV--TKKLNILVLGSGWESFVNAHDLNMGDFLVFKYNG--DFLLQVLIFDP 391
                      4568********999999..899****************..*******************************976..88889999985 PP
4B340.64.6e-135235733486
                      SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
               B3  34 ktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                      ++l+l++ + +sW+v++ ++++ks++  lt+GWk+Fv++n L+ gD ++F+  +
  ONIVA03G27320.2 523 QELMLRH-RDKSWKVRFyRFNNKSRK--LTQGWKRFVHDNYLRMGDLCLFEILK 573
                      5677766.78******9455777777..9**********************655 PP
5B357.52.6e-18607693297
                      EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
               B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                      fkv+     ++  r+++p++f++ + gk   ++t++l+ ++g +++v++  +k+ g++ l++GWk Fv a++L+ gDf+vF++dg s+   +v 
  ONIVA03G27320.2 607 FKVM--IGRFR-ERMIIPNEFLQYFRGK--IPRTIKLQLRDGCTYDVQV--TKNLGKISLQSGWKAFVTAHDLQMGDFLVFSYDGISKL--KVL 691
                      5555..44444.57********555666..66789999999********..********************************986555..777 PP

                      EE CS
               B3  96 vf 97 
                      +f
  ONIVA03G27320.2 692 IF 693
                      77 PP
6B347.63.1e-158179001299
                      HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      ks+ + + +++a+ +    ke +  +t  +++g+ Wev ++ +k  ++  l++GW++F+++n+L++gD+++F+l +++e +++v+++ k
  ONIVA03G27320.2 817 KSQTVDICREYADVYlP-FKELN--MT-LQRHGKNWEVLCR-TKDTRTKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIPK 900
                      56667777888877742.22333..44.348*********4.44444478***********************9999999999999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 901 aa     Download sequence    
MSKSGCERCR GRGFWDTDDQ DTYFFKVMIG GFRRQMTIPY KFAENFRDQI QGTIKLKARN  60
GNTCSVLVDK CSNKLVLTKG WAEFANSHDI KMGDFLVFRY TGNSQFEVKI FDPSGCVKAA  120
SHNAVNIGQH AQNMQGDPIE ILSCSDEHLR AQSLTTERQN QPEKDVIDNC NKKMKTEHAS  180
SSEDDQETPT AEVHRMKVEE MVRAIHSNHP VFVAVMKKSN VTRQPCYVAI SRKYANEYFP  240
GGDQMLTLQR HGKRWQVKFC ISKRKLRMLS KGWRKFTRDN ELQKMRKLNT RSTARDDQEK  300
YFFKVMIGDF HKRMTIPDKF ARHFKGVISK TIKLEPRNGY TFDVQVTKKL NILVLGSGWE  360
SFVNAHDLNM GDFLVFKYNG DFLLQVLIFD PSGCEKSTSC SMENAIDHVG QGWKEHNDIS  420
TSYHDQPKGN KHWMQKDSSS KGNKIGNTRS SNTPSNFSGC ILPRGTCLPV VQEKKMKEKI  480
QAIHSKTPMY GNVMTKCNVS GSPCVLEITQ LYDDAYLPFN NGQELMLRHR DKSWKVRFYR  540
FNNKSRKLTQ GWKRFVHDNY LRMGDLCLFE ILKNKYTMNM RRPGARCREG HAHFNGNHID  600
GQYKNFFKVM IGRFRERMII PNEFLQYFRG KIPRTIKLQL RDGCTYDVQV TKNLGKISLQ  660
SGWKAFVTAH DLQMGDFLVF SYDGISKLKV LIFGPSGCEK VHSRPTLKNA THCGEKWEEP  720
LHISSNSHDL PVKSPQNVSK SEKQWDSSEQ ENDTANIEEV ALQGDDLQGH PVLNCILPKH  780
TRLTDMQKQQ LESKVGAIHS EIPIYGCILR KSRVHGKSQT VDICREYADV YLPFKELNMT  840
LQRHGKNWEV LCRTKDTRTK RLSTGWSRFA QENNLQVGDI CLFELLKKKE YSMNVHIIPK  900
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-23B3 family protein