PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G27380.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 752aa    MW: 83785.7 Da    PI: 7.3306
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G27380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.72.1e-18421221499
                      T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        +++p +fa++++g    s  + l+++sg++W++ +   +++ +  vl++GWkeFv+ang++e+D ++F+++g s+f   v +f+ 
  ONIVA03G27380.1  42 ESMIVPSRFANNFNGH--ISEVVNLKSPSGKTWSIGV--ANSDTGeLVLRSGWKEFVDANGVQENDCLLFRYSGVSSF--DVLIFDP 122
                      45899*****888666..6779***************..5555555***************************99999..8888875 PP
2B336.58.8e-122963671584
                      -EE--HHH.HTT---..--SEEEEEETTS....-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
               B3  15 rlvlpkkfaeehggkkeesktltledesg....rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                       + ++ +fa ++ g+ +  +++++e   g     +W v++  r +s++ + ++GW++F+++ngL + D+++F+l
  ONIVA03G27380.1 296 TVGVSPEFAGRYLGP-AMAREVVMERGGGggggDQWHVRFVRRESSRG-FHGTGWRRFARDNGLLAHDVCLFEL 367
                      556778888888444.45668999998778999*******65555555.6788*******************96 PP
3B346.66.3e-154174951799
                      E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
               B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                      ++p +fa++++g    s ++ l+++sg++W++ +   +++ +  vl+ GWkeFv+ ng++egD ++ +++g  s+f   v +f+ 
  ONIVA03G27380.1 417 TVPARFANNFNGH--ISEEVNLRSPSGETWSIVV--ANSDAGeLVLQPGWKEFVDGNGIEEGDCLLVRYSGVsSSF--DVLIFDP 495
                      6899***888666..6779***************..5555445***************************987877..8888875 PP
4B3376.1e-12634714585
                      -..-HHHHT..T-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
               B3   5 ltpsdvlks..grlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        +s+v +s  +++ ++ +fa ++ g ++ +  +++le  ++g +W v + +r++ ++++ ++GW++F+ +n+L + D+++F+l+
  ONIVA03G27380.1 634 IHSSHVRSSkyCIVGVSPEFAGKYlGAVE-R--EVVLERaSRGGEWHVLFVHRQNTRGFY-GAGWRQFAGDNRLVAHDVCLFELT 714
                      4445554445599999********76563.3..6999998999*******9999999986.77*******************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    
MGMLKIGKNC SVCKEWQEHC YWSHMADDCK HFLTYMVGDF TESMIVPSRF ANNFNGHISE  60
VVNLKSPSGK TWSIGVANSD TGELVLRSGW KEFVDANGVQ ENDCLLFRYS GVSSFDVLIF  120
DPSGCEKATP HFVENRGFGR EEKSAGAEGG GRDGDKNGHH QHQLEMTPHK NSSSPCIIEM  180
KWGRNQSRLC IIDMYAAMGI IVVTTNIGTY MHERACLAEQ DHREEKKEGD DEDEDEDKDG  240
ENRYYFCRHG GRVTEYNLSK GDKEEISRVP VPVEPGNPVL VKVIHASHLL SSRYSTVGVS  300
PEFAGRYLGP AMAREVVMER GGGGGGGDQW HVRFVRRESS RGFHGTGWRR FARDNGLLAH  360
DVCLFELRLV DGAGAGDRLR RRPRPTMAVH VLRRARTAAF ARSGKNTATG AIWPTTTVPA  420
RFANNFNGHI SEEVNLRSPS GETWSIVVAN SDAGELVLQP GWKEFVDGNG IEEGDCLLVR  480
YSGVSSSFDV LIFDPSGCEK ASPHFVGSHG FGRAENSAGA EQGGRNGRRT PPIVDGDNGH  540
RHHLEMTLHR NSCRSIPRAC KRSLFSDETE AKENDGEDED EDVVAAAEGG RYGEYYFSRH  600
GRVAEYNLRK EDREEISRVP VPVQPGNPVF VQVIHSSHVR SSKYCIVGVS PEFAGKYLGA  660
VEREVVLERA SRGGEWHVLF VHRQNTRGFY GAGWRQFAGD NRLVAHDVCL FELTMVDAAA  720
GGSGNRRRRW SRRPTMTVHV LRRVRGRFVL LR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1377382DRLRRR
2378384RLRRRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-28B3 family protein