PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G28200.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CPP

Protein Properties

Length: 782aa MW: 86232 Da PI: 7.2605

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G28200.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	28.8	2.5e-09	538	564	15	41
TCR 15 kkYCeCfaagkkCseeCkCedCkNkee 41 k YCeCfa++++Cse+C+C +C+N+++ ONIVA03G28200.1 538 KSYCECFASEVYCSESCSCRGCFNDHS 564 99**********************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MSIKICPGEY DANITREEVV WSRRVLAAKD GTIWARLFMV DREGCWSLSS ILRQWLGSET 60 NKEGARGGGR FEVVATTCEV TIVVGCMKEM SAGQFYCKGE ERVDGGAGVK RRGAPQRKGD 120 SPFLNFVKSL SPISSSQPLD AVPNLQMIKS SDLVHIPSIF TPPEFTHFGL MNTSAKPCQD 180 GLSPYCHMTQ IGRSSCIKQS GPMTIASKNC SIDRSLSQAY HDSPDNASIL PTNLAQRIQL 240 SSDTLGSDKR HGIAGKTDHE TAQKHAKLSC FDQRCLDKMK QLTSGMNVQK RDLAKTHNDE 300 ITACDWDYLG TQYDSSVVPE SDLRFETAEL LLETPKNGDA MPGKSFLPIV EANLENSRRK 360 LFQGSADCYS QSAVDNIHAY CTSRGKEVAT NHVSGILPCP RESQLIPDHH FSDSLEVPSD 420 YMAMNPSAVS QHLRGLHRRS LFNDKVRDPT MGVQSASNLG ASTCATRHRS IPDDNYSKLV 480 GSPVCALPNV DLHLVRMTEE MLAPNTSEMN THNQGDYSSQ ATMPTSAGNS GQENPKRKSY 540 CECFASEVYC SESCSCRGCF NDHSHEETVL STRNRIESRN PLAFAPKVIR TCGPGLEFGE 600 DSNATPASSR HKRGIERFET KEIERADRKM KDHPKEEQSE MDKYHALCEI WGVRSTENLF 660 TTPSMDSRRA FALFPSECPK SSLTSSTRTS SHLHFPTRTD VLLSPFGSYT QMLLGNEASD 720 MLLQQGDSSC TASLRIASPN KKRVSPLRTG NTLSPTCRKE LGLKSIIPPF PSLTGDANSE 780 LQ

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MSIKICPGEY DANITREEVV WSRRVLAAKD GTIWARLFMV DREGCWSLSS ILRQWLGSET  60
NKEGARGGGR FEVVATTCEV TIVVGCMKEM SAGQFYCKGE ERVDGGAGVK RRGAPQRKGD  120
SPFLNFVKSL SPISSSQPLD AVPNLQMIKS SDLVHIPSIF TPPEFTHFGL MNTSAKPCQD  180
GLSPYCHMTQ IGRSSCIKQS GPMTIASKNC SIDRSLSQAY HDSPDNASIL PTNLAQRIQL  240
SSDTLGSDKR HGIAGKTDHE TAQKHAKLSC FDQRCLDKMK QLTSGMNVQK RDLAKTHNDE  300
ITACDWDYLG TQYDSSVVPE SDLRFETAEL LLETPKNGDA MPGKSFLPIV EANLENSRRK  360
LFQGSADCYS QSAVDNIHAY CTSRGKEVAT NHVSGILPCP RESQLIPDHH FSDSLEVPSD  420
YMAMNPSAVS QHLRGLHRRS LFNDKVRDPT MGVQSASNLG ASTCATRHRS IPDDNYSKLV  480
GSPVCALPNV DLHLVRMTEE MLAPNTSEMN THNQGDYSSQ ATMPTSAGNS GQENPKRKSY  540
CECFASEVYC SESCSCRGCF NDHSHEETVL STRNRIESRN PLAFAPKVIR TCGPGLEFGE  600
DSNATPASSR HKRGIERFET KEIERADRKM KDHPKEEQSE MDKYHALCEI WGVRSTENLF  660
TTPSMDSRRA FALFPSECPK SSLTSSTRTS SHLHFPTRTD VLLSPFGSYT QMLLGNEASD  720
MLLQQGDSSC TASLRIASPN KKRVSPLRTG NTLSPTCRKE LGLKSIIPPF PSLTGDANSE  780
LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	9e-26	CPP family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G28200.1