PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G29410.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 144aa    MW: 15004 Da    PI: 6.0044
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G29410.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS29.78.1e-103384281332
             GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332
                      ++   Er+ll++e + vvacega+ +erhe++++W +++e+  +++v ls++
  ONIVA03G29410.2  33 QAPREERVLLREETRGVVACEGAKLVERHERARHWAAWMEADDMEQVGLSYS 84 
                      555679*******************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MDHVRNSALA ALEGGVAGNK SVAGAGAAPG GAQAPREERV LLREETRGVV ACEGAKLVER  60
HERARHWAAW MEADDMEQVG LSYSGAMHGG EEAATELQVG GAVRPWLLIL LAHEAALRRL  120
RVAAGAVAPP PRSVIGEPAS CSID