PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G30250.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 310aa    MW: 32740.2 Da    PI: 5.1837
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G30250.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.91.2e-15161206555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h  +Er+RR++iN++f eL  ++Pk+     kK++Ka+iL  A  YI++Lq
  ONIVA03G30250.1 161 HVVAERKRREKINQRFMELSAVIPKL-----KKMDKATILSDAASYIRELQ 206
                      8899**********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDDSSLFLQW AVSTLQHQHP AAVAVVADDD ATFFSFQELC DAEEVVVVPV QEEVITEAHG  60
GGASRIGLAV AVDEHGGWSR SPNPGARPPS GGCGSNNLPL MSWDFSAASV AVQVQPNGGG  120
GGGAPEMAYG SPLAAGGSTT RKTSAPTVAA AAAAAYAQLE HVVAERKRRE KINQRFMELS  180
AVIPKLKKMD KATILSDAAS YIRELQEKLK ALEEQAAARV TEAAMATPSP ARAMNHLPVP  240
PEIEVRCSPT NNVVMVRIHC ENGEGVIVRI LADVEEIHLR IINANVMPFL DQGATMIITI  300
AAKASSSLLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165170ERKRRE
2166171RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.23e-24bHLH family protein