PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G31950.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NF-YA
Protein Properties Length: 340aa    MW: 36904.2 Da    PI: 9.7949
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G31950.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.16.2e-33253309158
        CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      +ep+YVNaKQy++Il+RRq+Rak+e ekk+  ksrkpylheSRh+hA+rR+Rg+gGrF
  ONIVA03G31950.2 253 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-VKSRKPYLHESRHQHAMRRARGTGGRF 309
                      69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MDPPVHAAEL NHRNNYGPLS SPNPISLRIR ARLSLARARE PVAAAAASSS SSEEPEPQRR  60
RAPPPIGRPL GERERERSIE SYWPPPPRPG CSLSRPGGTN LVEPRGQGAL PSGIPIQQPW  120
WTTSAGVGAV SPAVVAPGSG AGISLSGRDG GGDDAAEESS DDSRRSGETK DGSTGQEKHH  180
ATSQMTALAS DYLTPFSQLE LNQPIASAAY QYPDSYYMGM VGPYGPQAMS AQTHFQLPGL  240
THSRMPLPLE ISEEPVYVNA KQYHGILRRR QSRAKAELEK KVVKSRKPYL HESRHQHAMR  300
RARGTGGRFL NTKKNEDGAP SEKAEPNKGE QNSGVIIWMY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.14e-39NF-YA family protein